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Job DescriptionP25526
Confidence100.00%DateThu Jan 5 11:41:57 GMT 2012
Rank35Aligned Residues466
% Identity23%Templatec2vroB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:aldehyde dehydrogenase; PDBTitle: crystal structure of aldehyde dehydrogenase from2 burkholderia xenovorans lb400
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........50.........60.........70.........80.........90.
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Query Sequence  QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLA
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Template Sequence  KNHVAGQWIAG. TGAGITLTDPVTGVALVRVSSEGLDLARAFSFAREDGGAALRALTYAQRAARLADIVKLLQAKRGDYY
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TT

.SSS

TTT



TT

S
T
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   6...10...... ...20.........30.........40.........50.........60.........70.........80....
 
   92.......100.........110.........120....... ..130.........140.........150.........160..
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Query Sequence  RLMTLEQGKPLAEAKGEISYAASFIEWFAEEGKRIY. . . . . . . . . GDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAM
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Template Sequence  AIATANSGTTRNDSAVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWG
Template Known Secondary structure 


TT
S
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STTS

SS


TT
TT
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   85....90.........100.........110.........120.........130.........140.........150.........160....
 
   163......170.........180.........190.... .....200.........210.........220.........230.........240.
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Query Sequence  ITRKAGPALAAGCTMVLKPASQTPFSALALAE. LAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQL
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Template Sequence  LWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGL. . . LDQIRSFDVVSFTGSADTAATL
Template Known Secondary structure  TT



GGGT
S
TTS

S

TTT...GGG

TT
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   165....170.........180.........190.........200.........210......... 220.........230.........240.
 
   242.... ...250.........260......... 270.........280.........290.........300.........310....
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Query Sequence  MEQCA. . KDIKKVSLELGGNAPFIVFDDAD. . . . . LDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVS
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Template Sequence  RAHPAFVQRGARLNVEADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLA
Template Known Secondary structure  TSTT






TT

TTSGGGG

TT
GGGT
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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   315....320.........330.........340.........350.........360 .........370......... 380.......
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Query Sequence  KLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA. . . . . HERGGNFFQPTILVDVPAN. . AKVSKEET
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Template Sequence  KITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEV
Template Known Secondary structure  T

BB
TTSTT
SB


S
TTS
TTS

BSS
TTTS





S
TTT
SSTTT


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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   388.390........ .400.........410.........420.........430.........440...... ...450..
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Query Sequence  FGPLAPLFRFK. . . . DEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIIS. . . . . . . . . . . NEVAPF
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Template Sequence  FGPVASVAPYRVTALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTGHGNVMPMSLH
Template Known Secondary structure 
SS




TTTTSS
S
TTT
GGGTTT


SS


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   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
   453......460..... ....470.........480.
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Query Sequence  GGIKASGLGREGS. KYGIEDYLEIKYMCIG
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Template Sequence  GGPGRAGGGEELGGLRALAFYHRRSAIQAA
Template Known Secondary structure 

SGGG
S

SGGGGGGGG
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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