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Job DescriptionP25526
Confidence100.00%DateThu Jan 5 11:41:57 GMT 2012
Rank44Aligned Residues368
% Identity19%Templatec2h5gA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:delta 1-pyrroline-5-carboxylate synthetase; PDBTitle: crystal structure of human pyrroline-5-carboxylate synthetase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TRAAIDAANRALPAWRALTAKERATILRNWFNLMMEHQDDLARLMTLEQGKP. . . . . . . . . . . LAEAKGEISYAASFIEW
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Template Sequence  VEQQGEXARSGGRXLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTSKLNSLAIGLRQ
Template Known Secondary structure  S
TTTTS
TT


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   363......370.........380.........390.........400.........410.........420.........430.........440..
 
   119120.........130..... ....140.........150.........160.........170.........180.........190......
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Query Sequence  FAEEGKRIYGDTIPGHQ. . ADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELA
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Template Sequence  IAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVI. FESRP. DCLPQVAALAIASGNGLLLKGGKEAAHSNRILHLLT
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TTSTT
TT

.SS
T.TT


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   443......450.........460.........470......... 480.... .....490.........500.........510.........520
 
   197..200..... ....210.........220.........230.........240.........250.........260.........270...
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Query Sequence  IRAGVPAGV. . . FNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKA
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Template Sequence  QEALSIHGVKEAVQLVNTRE. . . . . . . . EVKXIDLIIPRGSSQLVRDIQKAA. . KGIPVXGHSEGICHXYVDSEASVDKV
Template Known Secondary structure  TTT
GGG

TT
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SS

..SSS
B
S
S



TT

TTT
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   521........530.........540 .........550.........560.... .....570.........580.........590
 
   274.....280.........290.........300.........310.........320.........330.........340.........350...
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Query Sequence  VEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGAR
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Template Sequence  TRLVRDSKC. EYPAACNALETLLIHRDLLRTPL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FDQIIDXLRVEQV.
Template Known Secondary structure  .S
TTSTTSGGGTTS.................................TT
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   598.600...... ...610.........620......... 630.........640..
 
   354.....360.........370.........380.........390.........400.........410.........420.........430...
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Query Sequence  VVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEAL
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Template Sequence  . . . . . . . . . . . . . . . . . KIHAGPKFASKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHV
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SS



SSSS

SS
S

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   643......650.........660.........670.........680.........690.........700.....
 
   434.....440.........450.........460 .........470.........480.
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Query Sequence  EYGIVGINTGIISNEVAPFGGIKASGL. . . . GREGSKYGIEDYLEIKYMCIG
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Template Sequence  DSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRG
Template Known Secondary structure 
SSSS
GGG
STTTTTSS

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GGGG
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   715....720.........730.........740.........750.........760......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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