Return to main results Retrieve Phyre Job Id

Job DescriptionP33011
Confidence7.87%DateThu Jan 5 11:50:46 GMT 2012
Rank11Aligned Residues92
% Identity17%Templated1iwga8
SCOP infoMultidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   73......80.........90.........100.........110. ........120.....
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Query Sequence  IGGTVLGSILGLIALQLELISLPLMLVWCAAAMFLCGWL. . . . . . . . . . . . . . . . . . . . . . . . . . . ALGKKPYQGLLIGV
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Template Sequence  VPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRLRPILMTSLAFIL
Template Known Secondary structure  TT

B
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   905....910.........920.........930.........940.........950.........960.........970.........980....
 
   126...130.........140.........150......... 160....
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Query Sequence  TLAIVVGSPTGEIDTALWRSGDVILGSLLAMLFT. GIWPQ
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Template Sequence  GVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPV
Template Known Secondary structure  TT
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   985....990.........1000.........1010.........1020....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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