Job Description P33011 Confidence 3.20% Date Thu Jan 5 11:50:46 GMT 2012 Rank 87 Aligned Residues 131 % Identity 11% Template c3tj5A_ PDB info PDB header:protein binding/toxin Chain: A: PDB Molecule:vinculin; PDBTitle: human vinculin head domain (vh1, residues 1-258) in complex with the2 vinculin binding site of the surface cell antigen 4 (sca4-vbs-n;3 residues 412-434) from rickettsia rickettsii Resolution 1.99 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	Q	R	A	F	I	H	W	R	I	Q	L	A	K	S	L	T	E	Y	N	R	V	Y	Q	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	P	N	L	L	E	R	P	R	L	E	S	H	L	Q	K	L	L	T	D	A	V	K	M	R	G	L	I	A	P	A	S
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	S	V	P	A	R	D	Y	L	I	D	G	S	R	G	I	L	S	G	T	S	D	L	L	L	T	F	D	E	A	E	V	R	K	I	I	R	V	C	K	G	I	L	E	Y	L	T	V	A	E	V	V	E	T	M	E	D	L	V	T	Y	T	K	N	L	G	P	G	M	T	K	M	A	K	M	I	D	E	R	Q
Template Known Secondary structure		T																																														T	T	G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.						.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																																					.	.	.	.	.
Query SS confidence																																					.	.	.	.	.
Query Sequence		K	E	T	R	I	P	K	S	I	Y	E	G	I	Q	T	I	N	R	N	L	V	C	M	L	E	L	Q	I	N	A	Y	W	A	T	R	.	.	.	.	.	P	S	H	F	V	L	L	N	A	Q	K	L	R	D	T	Q	H	M	M	Q	Q	I	L	L	S	L	V	H	A	L	Y	E	G	N	P	Q	P
Query Conservation																																					.	.	.	.	.
Alig confidence					.																																.	.	.	.	.
Template Conservation					.
Template Sequence		Q	E	L	.	T	H	Q	E	H	R	V	M	L	V	N	S	M	N	T	V	K	E	L	L	P	V	L	I	S	A	M	K	I	F	V	T	T	K	N	S	K	N	Q	G	I	E	E	A	L	K	N	R	N	F	T	V	E	K	M	S	A	E	I	N	E	I	I	R	V	L	Q	L	T	S	W	D	E
Template Known Secondary structure				B	.	S																																	T	T		S	S																													T				S
Template Predicted Secondary structure					.
Template SS confidence
		180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions