Return to main results Retrieve Phyre Job Id

Job DescriptionP33011
Confidence3.40%DateThu Jan 5 11:50:46 GMT 2012
Rank74Aligned Residues92
% Identity12%Templatec3nd0A_
PDB info PDB header:transport proteinChain: A: PDB Molecule:sll0855 protein; PDBTitle: x-ray crystal structure of a slow cyanobacterial cl-/h+ antiporter
Resolution3.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   73......80.........90.........100.........110.........120.........130.........140.........150..
Predicted Secondary structure 










Query SS confidence 















































































Query Sequence  IGGTVLGSILGLIALQLELISLPLMLVWCAAAMFLCGWLALGKKPYQGLLIGVTLAIVVGSPTGEIDTALWRSGDVILGS
Query Conservation 
 

 

  
      
           
                                          
    
 
 
Alig confidence 











































.....















.......







Template Conservation   


  
                     
 

 

      
 
.....


 

  



    .......
 
  

 
Template Sequence  GIASIVSVAMARHFHLLFPSQIPEPAVMAIAGMGALVAATVRAP. . . . . LTAILLTIEMTDNYFV. . . . . . . ILPLLVTC
Template Known Secondary structure 
TTT
SSTTTSS
.....TT


TT.......
Template Predicted Secondary structure 






.....

.......
Template SS confidence 















































































   354.....360.........370.........380.........390....... ..400.........410... ......420.
 
   153...... 160.........170......
Predicted Secondary structure  .




Query SS confidence 






.
















Query Sequence  LLAMLFT. GIWPQRAFIHWRIQLAK
Query Conservation    


  . 
 
      
   
  
Alig confidence 






.
















Template Conservation   

  
   
   


       
 
Template Sequence  LVASVVAEALGGKPIYTVLLERTLA
Template Known Secondary structure  TTS



T
Template Predicted Secondary structure 




Template SS confidence 
























   422.......430.........440......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions