 |
Job Description | P0ADX5 | Confidence | 1.82% | Date | Thu Jan 5 11:22:02 GMT 2012 |
Rank | 50 | Aligned Residues | 34 |
% Identity | 18% | Template | c1wdfA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:e2 glycoprotein; |
PDBTitle: crystal structure of mhv spike protein fusion core
|
Resolution | 2.50 Å |
|
  |   |
15 | . | . | . | . | 20 | . | . | . | |
. | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  | . |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Q | R | N | R | N | F | Q | A | . |
S | R | R | L | E | G | V | E | M | P | L | V | T | L | T | A | A | E | A | L | A | R | L | E | E |
Query Conservation |   |
  |
|
|
|   |
|
|
|
| . |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|   |   |
|
|
|   |
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |
|
|
|
|   |
|
|
|
|
|   |   |
Template Sequence |   |
N | Q | L | S | N | R | F | G | A | I | D | L | S | L | D | F | E | K | L | N | V | T | L | L | D | L | T | Y | E | M | N | R | I | Q | D |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |
|
|
|
|
|
|
| G | G | G |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1014 | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|