Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEK2
Confidence100.00%DateThu Jan 5 11:23:33 GMT 2012
Rank79Aligned Residues241
% Identity27%Templatec3r3sD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:oxidoreductase; PDBTitle: structure of the ygha oxidoreductase from salmonella enterica
Resolution1.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30......... 40.........50.........60.........70......
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Query Sequence  NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSE. . . . . NGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAE
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Template Sequence  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA
Template Known Secondary structure  TTTT
TTTSTT


GGGTT





TTS
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   46...50.........60.........70.........80.........90.........100.........110.........120.....
 
   77..80.........90.........100.........110.........120.........130.........140.........150......
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Query Sequence  FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKA
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Template Sequence  . LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKA
Template Known Secondary structure  .T










SSGGG

TGGG

TT


GGGTS

TT
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   126...130.........140.........150.........160.........170.........180.........190.........200....
 
   157..160.........170.........180.........190. ........200.........210.........220.........230....
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Query Sequence  GLIGFSKSLAREVASRGITVNVVAPGFIETDMTRA. . LSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGET
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Template Sequence  AILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQESSYVTAEV
Template Known Secondary structure  GGGT

SB

TTTS
GGGSTTTTTTSTTSS
B
GGGGSGGGTT

S
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   205....210.........220.........230.........240.........250.........260.........270.........280....
 
   235....240...
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Query Sequence  LHVNGGMYM
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Template Sequence  HGVCGGEHL
Template Known Secondary structure  STT


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   285....290...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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