Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEK2
Confidence100.00%DateThu Jan 5 11:23:33 GMT 2012
Rank137Aligned Residues224
% Identity34%Templatec3qljB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short chain dehydrogenase; PDBTitle: crystal structure of a short chain dehydrogenase from mycobacterium2 avium
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30......... 40.........50.........60.......
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Query Sequence  MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSE. . . . . . . . . . . . . NGAQAISDYLGANGKGLMLNVTDPASIE
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Template Sequence  GVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAA
Template Known Secondary structure 
TTTT
TTTTSTT



B
TTSSBT
TTSTT




TTS
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   68.70.........80.........90.........100.........110.........120...... ...130.........140.
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Query Sequence  SVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMM. . . . . . KKRHGRIITIGSVVG
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Template Sequence  GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG
Template Known Secondary structure  S










B
GGG

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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   142.......150.........160.........170.........180.........190.........200.........210.........220.
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Query Sequence  TMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAF
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Template Sequence  LQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPSA. . . . . . . . . . . . . . . . . . . . RTRFDAMAPENVSPLVVW
Template Known Secondary structure 
BTTBGGGT
T....................T



TT
GGGT
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   162.......170.........180.........190.........200... ......210.........220.
 
   222.......230.........240....
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Query Sequence  LASDEAAYITGETLHVNGGMYMV
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Template Sequence  LGSAEARDVTGKVFEVEGGKIRV
Template Known Secondary structure  TSGGGTT

S
TT
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   238.240.........250.........260
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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