Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEK2
Confidence100.00%DateThu Jan 5 11:23:33 GMT 2012
Rank17Aligned Residues243
% Identity33%Templatec3pk0B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:short-chain dehydrogenase/reductase sdr; PDBTitle: crystal structure of short-chain dehydrogenase/reductase sdr from2 mycobacterium smegmatis
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.. .......60.........70......
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Query Sequence  MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGAN. . . . GKGLMLNVTDPASIESVLEKIRAE
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Template Sequence  FDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEE
Template Known Secondary structure  T

TT
TT
SSTT
S
TTSSS


TTS
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   77..80.........90.........100.........110.........120.........130.........140. ........150.....
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Query Sequence  FGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG. TMGNGGQANYAAAK
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Template Sequence  FGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATK
Template Known Secondary structure  S

S








TTT

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SBTTTB

TT
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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
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Query Sequence  AGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETL
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Template Sequence  AAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLAAFLATKEAGYITGQAI
Template Known Secondary structure  GGGT

SB

TT
TTSTTSS
B
SGGGTT

S
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   236...240...
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Query Sequence  HVNGGMYM
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Template Sequence  AVDGGQVL
Template Known Secondary structure  STTTT
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   242.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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