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Job DescriptionP0AEK2
Confidence100.00%DateThu Jan 5 11:23:33 GMT 2012
Rank59Aligned Residues242
% Identity24%Templatec3ijrF_
PDB info PDB header:oxidoreductaseChain: F: PDB Molecule:oxidoreductase, short chain dehydrogenase/reductase family; PDBTitle: 2.05 angstrom resolution crystal structure of a short chain2 dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex3 with nad+
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.... .....70........
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Query Sequence  NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPA. . . SIESVLEKIRAEFG
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Template Sequence  KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL
Template Known Secondary structure  TTTT
TTTSTT
SS
TTTS
S
TTS
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   41........50.........60.........70.........80.........90.........100.........110.........120
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  EVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGL
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Template Sequence  GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAI
Template Known Secondary structure  S










SSGGG

TTT

TT


T

TT
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   121........130.........140.........150.........160.........170.........180.........190.........200
 
   159160.........170.........180.........190... ......200.........210.........220.........230.......
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Query Sequence  IGFSKSLAREVASRGITVNVVAPGFIETDMTRALS. DDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHV
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Template Sequence  VAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPXQRPGQPYELAPAYVYLASSDSSYVTGQXIHV
Template Known Secondary structure  GGGT

SB
STTTTTTS
TTTTTTSTTSS
B
GGGTSGGGTT

S
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   201........210.........220.........230.........240.........250.........260.........270.........280
 
   238.240...
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Query Sequence  NGGMYM
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Template Sequence  NGGVIV
Template Known Secondary structure  SSS


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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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