Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEK2
Confidence98.63%DateThu Jan 5 11:23:33 GMT 2012
Rank243Aligned Residues210
% Identity14%Templatec3i5mA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:putative leucoanthocyanidin reductase 1; PDBTitle: structure of the apo form of leucoanthocyanidin reductase from vitis2 vinifera
Resolution2.72 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
Predicted Secondary structure 


























Query SS confidence 















































































Query Sequence  GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILV
Query Conservation 

  





 


 


  
   

 

   
                                               
Alig confidence 

.












































































Template Conservation 

.







 

  
   

  
  
    
              
    
  
  
  
               
  
Template Sequence  GR. VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVS
Template Known Secondary structure 

.
TTSTT


SS


TT


TT
T

Template Predicted Secondary structure 
.


























Template SS confidence 















































































   11. .......20.........30.........40.........50.........60.........70.........80.........
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
Predicted Secondary structure 





















































Query SS confidence 















































































Query Sequence  NNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKS
Query Conservation                                                       
            
  

         
Alig confidence 









....................

















































Template Conservation            ....................     
            
             
   
   
   
     
Template Sequence  TVGGESILDQ. . . . . . . . . . . . . . . . . . . . IALVKAMKAVGTIKRFLPSEFGHDVNRADPVEPGLNMYREKRRVRQLVEE
Template Known Secondary structure 


TTSGGG....................


S
S

SS
TTT



TT
Template Predicted Secondary structure 





....................















Template SS confidence 















































































   90......... 100.........110.........120.........130.........140.........
 
   165....170.........180.........190.........200....... ..210.........220.........230.........240.
Predicted Secondary structure 






















...













Query SS confidence 










































. . .

































Query Sequence  LAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAG. . . RLGGAQEIANAVAFLASDEAAYITGETLHVNGGM
Query Conservation   
       
 
  
 

 
 
                  
  ...
   




     
 
     


  
 



 
Alig confidence 
.......


































...




















.











Template Conservation   .......    

 
                                
   


      
     .            
Template Sequence  S. . . . . . . GIPFTYICCNSIASWPYYNNVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRT. LNKSVHFRPSCN
Template Known Secondary structure  T.......T

B

SS




.



SS
TTS



TT
GGG.TT


GGG
Template Predicted Secondary structure 
.......

























.







Template SS confidence 















































































   150 .........160.........170.........180.........190.........200......... 210.........220.
 
   242.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  YM
Query Conservation   
Alig confidence 

Template Conservation    
Template Sequence  CL
Template Known Secondary structure 
Template Predicted Secondary structure 

Template SS confidence 

   227.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions