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Job DescriptionP0AEK2
Confidence100.00%DateThu Jan 5 11:23:33 GMT 2012
Rank52Aligned Residues228
% Identity41%Templatec3f9iB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:3-oxoacyl-[acyl-carrier-protein] reductase; PDBTitle: crystal structure of 3-ketoacyl-(acyl-carrier-protein) reductase2 rickettsia prowazekii
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEV
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Template Sequence  IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT. . . . . . .
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TT
TTTTSTT
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T
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   2.......10.........20.........30.........40.........50.........60.........70....
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG
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Template Sequence  . . . . . . . . . SNLDILVCNAGITDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIGNPGQANYCASKAGLIG
Template Known Secondary structure  .........SS







TT








S

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   75....80.........90.........100.........110.........120.........130.........140.....
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGG
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Template Sequence  MTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFLASNNASYITGQTLHVNGG
Template Known Secondary structure  GGGT
SB

SS

S

T
TTSS
B
SGGGTT

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   158.160.........170.........180.........190.........200.........210.........220.........230.......
 
   241...
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Query Sequence  MYMV
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Template Conservation     
Template Sequence  MLMV
Template Known Secondary structure  SS

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   238.240.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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