 |
Job Description | P0AEK2 | Confidence | 95.80% | Date | Thu Jan 5 11:23:33 GMT 2012 |
Rank | 451 | Aligned Residues | 48 |
% Identity | 23% | Template | c3aogA_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:glutamate dehydrogenase; |
PDBTitle: crystal structure of glutamate dehydrogenase (gdhb) from thermus2 thermophilus (glu bound form)
|
Resolution | 2.10 Å |
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | F | E | G | K | I | A | L | V | T | G | A | S | R | G | I | G | R | A | I | A | E | T | L | A | A | R | G | A | K | V | I | G | T | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | S | E | N | G | A | Q | A | I | S | D | Y | L | G |
Query Conservation |   |
  |
|   |
|
|   |   |
|
|
|
|
|
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |
|
|   |
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |   |
|
|
|
|
|   | . |
|   |
|
|   |   |   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
Q | V | E | G | A | R | V | A | I | Q | G | F | . |
G | N | V | G | N | A | A | A | R | A | F | H | D | H | G | A | R | V | V | A | V | Q | D | H | T | G | T | V | Y | N | E | A | G | I | D | P | Y | D | L | L | R | H | V | Q | E | F | G |
Template Known Secondary structure |   |
| S | T | T |
|  |  |  |  |  |
|
| . | S |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S | S |
|  |  |  |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
216 | . | . | . | 220 | . | . | . | . | . | . | . | |
. | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|