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Job DescriptionP0AEK2
Confidence98.87%DateThu Jan 5 11:23:33 GMT 2012
Rank232Aligned Residues236
% Identity14%Templatec2hrzA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:nucleoside-diphosphate-sugar epimerase; PDBTitle: the crystal structure of the nucleoside-diphosphate-sugar epimerase2 from agrobacterium tumefaciens
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEV
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Template Sequence  LYFQGXHIAIIGAAGXVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGEAEKLVEARPDV
Template Known Secondary structure  S

S
TTTS
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TT

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S
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   81........90.........100.........110.........120.........130.........140....... .
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Query Sequence  DILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGG. . . . . . . . . . . . Q
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Template Sequence  IFHLAAIVSGEA. . . . . . . ELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPL
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S
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   84.....90..... ....100.........110.........120.........130.........140.........150......
 
   149150.........160.........170...... ...180.........190.........200.........210.. ....
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Query Sequence  ANYAAAKAGLIGFSKSLAREVASRGITV. . . NVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGA. . . . . . . . . QEIA
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Template Sequence  TSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAV
Template Known Secondary structure  STTS

TT

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SGGGTT


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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   217..220.........230.........240...
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Query Sequence  NAVAFLASDEAAYITGETLHVNGGMYM
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Template Sequence  GFLIHGAXIDVEKVGPRRNLSXPGLSA
Template Known Secondary structure  S

S




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   237..240.........250.........260...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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