Job Description P0AEK2 Confidence 100.00% Date Thu Jan 5 11:23:33 GMT 2012 Rank 123 Aligned Residues 233 % Identity 33% Template c2ekqB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:2-deoxy-d-gluconate 3-dehydrogenase; PDBTitle: structure of tt0495 protein from thermus thermophilus Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	I	A	L	V	T	G	A	S	R	G	I	G	R	A	I	A	E	T	L	A	A	R	G	A	K	V	I	G	T	A	T	S	E	N	G	A	Q	A	I	S	D	Y	L	G	A	N	G	K	G	L	M	L	N	V	T	D	P	A	S	I	E	S	V	L	E	K	I	R	A	E	F	G	E	V	D	I	L	V
Query Conservation
Alig confidence																																															.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.
Template Sequence		E	R	K	A	L	V	T	G	G	S	R	G	I	G	R	A	I	A	E	A	L	V	A	R	G	Y	R	V	A	I	A	S	R	N	P	E	E	A	A	Q	S	L	G	A	V	.	.	.	.	.	.	P	L	P	T	D	L	E	K	D	D	P	K	G	L	V	K	R	A	L	E	A	L	G	G	L	H	V	L	V
Template Known Secondary structure									T	T	T	S													T	T								S	S									T			.	.	.	.	.	.						T	T	T	S														T	S
Template Predicted Secondary structure																																															.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		N	N	A	G	I	T	R	D	N	L	L	M	R	M	K	D	E	E	W	N	D	I	I	E	T	N	L	S	S	V	F	R	L	S	K	A	V	M	R	A	M	M	K	K	R	H	G	R	I	I	T	I	G	S	V	V	G	T	M	G	N	G	G	.	.	Q	A	N	Y	A	A	A	K	A	G	L	I	G	F	S
Query Conservation																																																																	.	.
Alig confidence																																																																	.	.
Template Conservation
Template Sequence		H	A	A	A	V	N	V	R	K	P	A	L	E	L	S	Y	E	E	W	R	R	V	L	Y	L	H	L	D	V	A	F	L	L	A	Q	A	A	A	P	H	M	A	E	A	G	W	G	R	V	L	F	I	G	S	V	T	T	F	T	A	G	G	P	V	P	I	P	A	Y	T	T	A	K	T	A	L	L	G	L	T
Template Known Secondary structure												T	T	T														T																		T										G	G	G	T	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		K	S	L	A	R	E	V	A	S	R	G	I	T	V	N	V	V	A	P	G	F	I	E	T	D	M	T	R	A	.	.	L	S	D	D	Q	R	A	G	I	L	A	Q	V	P	A	G	R	L	G	G	A	Q	E	I	A	N	A	V	A	F	L	A	S	D	E	A	A	Y	I	T	G	E	T	L	H	V	N	G	G
Query Conservation																															.	.
Alig confidence																															.	.
Template Conservation
Template Sequence		R	A	L	A	K	E	W	A	R	L	G	I	R	V	N	L	L	C	P	G	Y	V	E	T	E	F	T	L	P	L	R	Q	N	P	E	L	Y	E	P	I	T	A	R	I	P	M	G	R	W	A	R	P	E	E	I	A	R	V	A	A	V	L	C	G	D	E	A	E	Y	L	T	G	Q	A	V	A	V	D	G	G
Template Known Secondary structure									G	G	G	T										S	B		S	G	G	G					T										T	T		T	T	S	S		B													T	S	G	G	G	T	T			S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		241	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Y	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	A
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		236	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions