Job Description P0AEK2 Confidence 99.10% Date Thu Jan 5 11:23:33 GMT 2012 Rank 220 Aligned Residues 219 % Identity 12% Template c1z7eC_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:protein arna; PDBTitle: crystal structure of full length arna Resolution 3.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		N	F	E	G	K	I	A	L	V	T	G	A	S	R	G	I	G	R	A	I	A	E	T	L	A	A	R	G	.	A	K	V	I	G	T	A	T	S	E	N	G	A	Q	A	I	S	D	Y	L	G	A	N	G	K	G	L	M	L	N	V	T	D	P	A	S	I	E	S	V	L	E	K	I	R	A	E	F	G	E	V
Query Conservation																														.
Alig confidence																														.																			.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	R	R	T	R	V	L	I	L	G	V	N	G	F	I	G	N	H	L	T	E	R	L	L	R	E	D	H	Y	E	V	Y	G	L	D	I	G	S	D	A	I	S	R	F	L	N	.	.	H	P	H	F	H	F	V	E	G	D	I	S	I	H	S	E	W	I	E	Y	.	.	.	.	.	.	.	.	.	.	H
Template Known Secondary structure												T	T	T	S													S	S	S								S			T	T	T	G	G	G	T	T	.	.		T	T								T	T	T								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																	.	.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.			350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.											370
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	I	L	V	N	N	A	G	I	T	R	D	N	L	L	M	R	M	K	D	E	E	W	N	D	I	I	E	T	N	L	S	S	V	F	R	L	S	K	A	V	M	R	A	M	M	K	K	R	H	G	R	I	I	T	I	G	S	V	V	G	T	M	G	N	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.
Template Sequence		V	K	K	C	D	V	V	L	P	L	V	A	I	A	T	P	I	E	Y	T	R	N	P	L	R	V	F	E	L	D	F	E	E	N	L	R	I	I	R	Y	C	V	K	Y	R	.	.	.	.	.	K	R	I	I	F	P	S	T	S	E	V	Y	G	M	C	S	D	K	Y	F	D	E	D	H	S	N	L	I	V	G
Template Known Secondary structure						S											T						S									T													T	T	.	.	.	.	.									G	G	G	G	B	T			S	S	S	B		T	T	T				B
Template Predicted Secondary structure																																															.	.	.	.	.
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.						.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
						147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.											.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure		.	.	.	.																																										.	.	.	.	.	.	.	.	.	.																									.
Query SS confidence		.	.	.	.																																										.	.	.	.	.	.	.	.	.	.																									.
Query Sequence		.	.	.	.	G	Q	A	N	Y	A	A	A	K	A	G	L	I	G	F	S	K	S	L	A	R	E	V	A	S	R	G	I	T	V	N	V	V	A	P	G	F	I	E	T	D	.	.	.	.	.	.	.	.	.	.	M	T	R	A	L	S	D	D	Q	R	A	G	I	L	A	Q	V	P	A	G	R	L	G	G	.
Query Conservation		.	.	.	.																																										.	.	.	.	.	.	.	.	.	.																									.
Alig confidence		.	.	.	.																								.	.	.																.	.	.	.	.	.	.	.	.	.																									.
Template Conservation																													.	.	.
Template Sequence		P	V	N	K	P	R	W	I	Y	S	V	S	K	Q	L	L	D	R	V	I	W	A	Y	G	E	K	E	.	.	.	G	L	Q	F	T	L	F	R	P	F	N	W	M	G	P	R	L	D	N	L	N	A	A	R	I	G	S	S	R	A	I	T	Q	L	I	L	N	L	V	E	G	S	P	I	K	L	I	D	G	G
Template Known Secondary structure			T	T		T	T																						.	.	.											S			S	T	T	S	S						T	T	T		S													T							G	G	G
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.				.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.
										212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	A	Q	E	I	A	N	A	V	A	F	L	A	S	D	E	A	A	Y	I	T	G	E	T	L	H	V	N	G	G
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Q	K	R	C	F	T	D	I	R	D	G	I	E	A	L	Y	R	I	I	E	N	A	G	N	R	C	D	G	E	I	I	N	I	G	N	P
Template Known Secondary structure																							T	G	G	G	T	T	T	T								G
Template Predicted Secondary structure
Template SS confidence
		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions