Return to main results Retrieve Phyre Job Id

Job DescriptionP76458
Confidence100.00%DateWed Jan 25 15:21:08 GMT 2012
Rank14Aligned Residues170
% Identity21%Templated2g39a1
SCOP infoNagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like CoA transferase alpha subunit-like
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  KTKLMTLQDATGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIGTN
Query Conservation 
 
  

 


  



  
  

      
 


 

       

               
   
 
        
  
Alig confidence 















































































Template Conservation    

 

 


  

 

 
   
      
  
  


 
       
                 
        
 
 
Template Sequence  LDKVXSAAEAADLIQDGXTVGXSGFTRAGEAKAVPQALAXRAKERPLRISLXTGASLGNDLDKQLTEAGVLARRXPFQVD
Template Known Secondary structure  GGGB

TT

TT


BTTBS


S



SS


TTTT
S



Template Predicted Secondary structure 




































Template SS confidence 















































































   12.......20.........30.........40.........50.........60.........70.........80.........90.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  PETGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVVEEGKQTLTLDGKTWLLERPLRADLALIRAHRCDT
Query Conservation 
  
  
  
               


 
 
 
        

            
   
    
  




 

 

 
Alig confidence 






























..................................














Template Conservation     
  
  
  

 
 


  
 
   
  ..................................   




 


 

Template Sequence  STLRKAINAGEVXFIDQHLSETVEQLRNHQL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . KLPDIAVIEAAAITE
Template Known Secondary structure  TTSS



TTTTTSS..................................


SS
T
Template Predicted Secondary structure 








..................................







Template SS confidence 















































































   92.......100.........110.........120.. .......130.......
 
   162.......170.........180.........190.........200......
Predicted Secondary structure 






















Query SS confidence 












































Query Sequence  LGNLTYQLSARNFNPLIALAADITLVEPDELVETGELQPDHIVTP
Query Conservation   

 
  
         
 

  





 


     
  
 

Alig confidence 





.





































Template Conservation   

 

.
 

     
   
  





  

    
 


   
Template Sequence  QGHIVP. TTSVGNSASFAIFAKQVIVEINLAHSTNLEGLHDIYIP
Template Known Secondary structure  TS

.
S

TTSSTTS
GGGTTS

B


Template Predicted Secondary structure 

.



















Template SS confidence 












































   138.140... ......150.........160.........170.........180.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions