Job Description P76458 Confidence 18.73% Date Wed Jan 25 15:21:08 GMT 2012 Rank 61 Aligned Residues 101 % Identity 15% Template c3kv1A_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional repressor; PDBTitle: crystal structure of putative sugar-binding domain of transcriptional2 repressor from vibrio fischeri Resolution 1.70 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.							.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		L	Q	D	A	T	G	F	F	R	D	G	M	T	I	M	V	G	G	F	M	G	I	G	T	P	S	R	L	V	E	A	L	L	E	S	G	V	R	D	L	T	L	I	A	N	D	T	A	F	V	D	T	G	I	G	P	L	I	V	N	.	.	.	.	.	.	G	R	V	R	K	V	I	A	S	H	I	G	T	N
Query Conservation																																																														.	.	.	.	.	.
Alig confidence																			.	.			.																																							.	.	.	.	.	.
Template Conservation																			.	.			.
Template Sequence		S	S	Y	L	N	N	N	L	Q	E	G	X	A	V	A	V	G	.	.	Q	G	.	Q	N	V	A	A	V	A	D	H	A	G	I	V	T	Q	R	N	A	R	F	V	S	A	I	G	G	T	H	I	I	N	A	D	H	I	C	R	R	L	A	K	K	Y	G	G	S	S	E	T	L	Y	A	P	A	Y	V	N	D
Template Known Secondary structure											T	T							.	.		S	.																							S	B		B																		T								S	B	S	B		S	S
Template Predicted Secondary structure																			.	.			.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.			60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	T	G	R	R	M	I	S	G	E	M	D	V	V	L	V	P	Q	G	T	L	I	E	Q	I	R	C	G	G	A	G	L	G	G	F	L	T	P	T	G	V	G	T	V	V	E	E	G	K	Q	T	L	T	L	D	G	K	T	W	L	L	E	R	P	L	R	A	D	L	A	L	I	R	A
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	S	L	R	S	A	F	X	E	H	A	.	.	.	.	.	.	.	.	.	T	I	K	E	T	L	S	Q	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	E	F	A	L	V	G	I
Template Known Secondary structure										T	S		.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.										.	.	.	.	.	140	.	.	.	.																																					.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions