Return to main results Retrieve Phyre Job Id

Job DescriptionP76458
Confidence100.00%DateWed Jan 25 15:21:08 GMT 2012
Rank12Aligned Residues178
% Identity22%Templatec2hj0A_
PDB info PDB header:lyaseChain: A: PDB Molecule:putative citrate lyase, alfa subunit; PDBTitle: crystal structure of the putative alfa subunit of citrate lyase in2 complex with citrate from streptococcus mutans, northeast structural3 genomics target smr12 (casp target).
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.... ...10.... .....20......... 30.........40.........50.........60.........70......
Predicted Secondary structure 


.
..










..



















Query SS confidence 




.







. .














. .














































Query Sequence  KTKLM. TLQDATGF. . FRDGMTIMVGGFMGI. . GTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVIAS
Query Conservation 
 
  .

 


  ..



  
  

    ..  
 


 

       

               
   
 
      
Alig confidence 




.







..














..














































Template Conservation    
   
  

     






        
  
   
       
 
   
           
      
 
      
Template Sequence  DDKLLSSIHEAIEKTRLKDGXTISFHHHFREGDYVXNXVLDEIAKXGIKDISIAPSSIANVHEPLIDHIKNGVVTNITSS
Template Known Secondary structure 


S
TT

TT


TTGGGB
TT

SS


GGGTTTTSS
Template Predicted Secondary structure 





































Template SS confidence 















































































   45....50.........60.........70.........80.........90.........100.........110.........120....
 
   77..80.........90.... .....100.........110.........120.........130.........140.........150....
Predicted Secondary structure 







..





























Query SS confidence 

















. .



























































Query Sequence  HIGTNPETGRRMISGEMD. . VVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVVEEGKQTLTLDGKTWLLERPLRADLALI
Query Conservation    
  
  
  
  
   ..            


 
 
 
        

            
   
    
  




Alig confidence  ..















..
















...................................







Template Conservation  ..   
     
  
           


   
  
 ...................................  





Template Sequence  . . GLRDKVGAAISEGIXENPVIIRSHGGRARAIATDD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . IHIDVAFL
Template Known Secondary structure  ..B
TT

SS


TS...................................S

S
Template Predicted Secondary structure  ..

















...................................

Template SS confidence 















































































   125....130.........140.........150......... 160.......
 
   155....160........ .170.........180.........190.........200.........210.........
Predicted Secondary structure 






.....

























Query SS confidence 













. . . . .


















































Query Sequence  RAHRCDTLGNLTYQ. . . . . LSARNFNPLIALAADITLVEPDELVETGELQPDHIVTPGAVIDHIIVSQES
Query Conservation   

 

  

 
  .....
         
 

  





 


     
  
 

   





    
Alig confidence 













.....


























...




















Template Conservation 


 


 



   
     

  
 


  

 




  


 ... 
  
 

   

 

  
 
Template Sequence  GAPSSDAYGNANGTRGKTTCGSLGYAXIDAKYADQVVIVTDTLVPY. . . PNTPISIPQTDVDYIVVVDAI
Template Known Secondary structure  S
TTS
SSSSSS

S


SSSB

S...S
SS
SB
GGG
S
S
S
Template Predicted Secondary structure 























...











Template SS confidence 





































































   168.170.........180.........190.........200.........210... ......220.........230....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions