 |
Job Description | P75794 | Confidence | 73.79% | Date | Thu Jan 5 12:14:13 GMT 2012 |
Rank | 101 | Aligned Residues | 83 |
% Identity | 18% | Template | d2bhua3 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 1.1 |
|
 |
  |   |
214 | . | . | . | . | . | 220 | . | . | . | . | . | . | . | |
|
. | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | |
. | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | I | I | I | R | V | P | L | I | Q | G | F | N | A | . |
. |
D | E | T | S | V | K | A | I | T | D | F | A | A | D | E | L | H | V | G | E | I | H | F | L | P | Y | H | T | L | G | I | N | K | Y | . |
H | L | L | N | L | P | Y | D | A | P | E | K | P | L | D | A | P | E | L | L | D | F | A | Q | Q | Y | A | C | Q |
Query Conservation |   |
  |   |   |
|   |   |   |   |
|   |   |   |
|
| . | . |   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|   |   |
|   | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|   |   |
|   |   |
|   |   |   |
|
|   |   |
|
|   |   |   |
|
|
|
|   |   |
| . |
|
|   |   |
|   |
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |
Template Sequence |   |
D | C | V | F | Y | E | V | H | V | G | T | F | T | P | E | G | T | Y | R | A | A | A | E | K | L | P | Y | L | K | E | L | . |
G | V | T | A | I | Q | V | M | P | L | A | A | F | D | G | Q | R | G | W | G | Y | D | G | A | A | F | Y | A | P | Y | A | P | Y | G | R | P | E | D | L | M | A | L | V | D | A | A | H | R |
Template Known Secondary structure |   |
G |
|
|  |  |  |  |
|  |  |  |  | S | S | S |
| S |  |  |  |  |  |  | T |  |  |  |  |  |  |  | . | T |
|
|  |  |  |  |
|
|
|  |  |
| S | S | S |
|
|
| S | T | T |
|
|  |  |  |  |  |
| G | G | G |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
. | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |
  |   |
291 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
K | G | L | T | A | T | L |
Query Conservation |   |
  |
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |
|
|
|
Template Sequence |   |
L | G | L | G | V | F | L |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
205 | . | . | . | . | 210 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|