Job Description P75794 Confidence 54.46% Date Thu Jan 5 12:14:13 GMT 2012 Rank 131 Aligned Residues 172 % Identity 10% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		Q	A	L	T	V	C	G	E	V	K	S	V	E	E	I	M	T	T	V	L	R	D	K	P	F	Y	D	R	S	G	G	G	L	.	T	L	S	G	G	E	P	F	M	Q	P	E	M	A	M	A	L	L	Q	A	S	H	E	A	G	I	H	T	A	V	E	T	C	L	H	V	P	W	K	Y	I	A	P	S	L	P
Query Conservation																																			.
Alig confidence																											.	.	.	.	.	.			.													.
Template Conservation																											.	.	.	.	.	.																.
Template Sequence		E	G	E	Q	F	A	N	A	F	F	D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	.	.	.	.	.	.	G	V	D	Y	I	E	L	T	S	P	V	A	S	E	Q	.	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	M	D	D	A	R	V	A	V	E
Template Known Secondary structure		G	G	G	G	S	T	T																			.	.	.	.	.	.	T		S							G	G	G				.										T	S			S	S								S
Template Predicted Secondary structure																											.	.	.	.	.	.																.
Template SS confidence
		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		174		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.																								.	.	.
Query SS confidence			.																								.	.	.
Query Sequence		Y	.	I	D	L	F	L	A	D	L	K	H	V	A	D	A	P	F	K	Q	W	T	D	G	N	.	.	.	A	A	R	V	L	D	N	L	K	K	L	A	A	A	G	K	K	I	I	I	R	V	P	L	I	Q	G	F	N	A	D	E	T	S	V	K	A	I	T	D	F	A	A	D	E	L	H	V	G	E	I	H
Query Conservation			.																								.	.	.
Alig confidence			.													.	.										.	.	.																	.	.																												.
Template Conservation																.	.																													.	.																												.
Template Sequence		T	G	V	D	G	V	D	V	V	I	G	T	S	Q	.	.	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	.	.	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	.	G	V	N	R	V	G
Template Known Secondary structure		T	T		S								G	G	G	.	.																										T	T		.	.							T	T	G	G	G	S																.			S
Template Predicted Secondary structure																.	.																													.	.																												.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	P	Y	H	T	L	G	I	N	K	Y	H	L	L	N	L	P	Y	D	A	P	E	K	P	L	D	A	P	E	L	L	D	F	A	Q	Q	Y	A	C	Q	K	G	L	T	A	T	L	R
Query Conservation
Alig confidence			.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation			.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Sequence		I	.	.	A	D	T	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	.	V	S	C	D	I	E
Template Known Secondary structure			.	.			S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.		S	S
Template Predicted Secondary structure			.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template SS confidence
		194			.	.	.	.	.																		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions