Job Description P75794 Confidence 93.09% Date Thu Jan 5 12:14:13 GMT 2012 Rank 63 Aligned Residues 187 % Identity 14% Template c3e49A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein duf849 with a tim barrel fold; PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 with a tim barrel fold (bxe_c0966) from burkholderia xenovorans lb4003 at 1.75 a resolution Resolution 1.75 Å

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		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.					.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																	.	.	.	.																													.	.																					.
Query SS confidence																	.	.	.	.																													.	.																					.
Query Sequence		T	D	C	C	P	T	Q	A	L	T	V	C	G	E	V	.	.	.	.	K	S	V	E	E	I	M	T	T	V	L	R	D	K	P	F	Y	D	R	S	G	G	G	L	T	L	S	G	.	.	G	E	P	F	M	Q	P	E	M	A	M	A	L	L	Q	A	S	H	E	A	.	G	I	H	T	A	V	E	T	C	L
Query Conservation																	.	.	.	.																													.	.																					.
Alig confidence																	.	.	.	.																													.	.																					.
Template Conservation
Template Sequence		I	T	C	A	V	T	G	A	I	H	T	P	S	X	S	P	Y	L	P	V	T	P	D	E	V	A	Q	A	S	I	G	A	A	E	A	G	A	A	V	I	H	L	H	A	R	D	P	R	D	G	R	P	T	Q	D	P	A	A	F	A	E	F	L	P	R	I	K	S	N	T	D	A	V	I	N	L	T	T	G	G
Template Known Secondary structure							S		S	S	S		G	G	G		T	T	S			S															T		S									T	T	T											T	T																	S		S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
					162	.	.	.	.	.	.	.	170	.	.	.	.		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190																							.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	H	V	P	W	K	Y	I	A	P	S	L	P	Y	.	I	D	L	F	L	A	D	L	K	H	V	A	D	A	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	W	T	D	G	N	A	A	R	V	L	D	N	L	K	K	L	A	A	A	G	K	K	I
Query Conservation		.	.	.														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.														.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	H	X	T	V	E	E	R	L	R	P	A	T	H	Y	X	P	E	L	A	S	L	N	X	G	S	X	N	F	G	L	Y	P	X	L	E	R	F	K	E	F	A	H	G	W	E	R	E	H	L	E	R	S	R	D	L	V	F	K	N	T	F	A	D	I	E	F	I	L	K	T	C	G	G	N	G	T	R	F
Template Known Secondary structure			T	T	S															S							S							G	G	G	G	G	T					S	S									G	G	G	G																			T	T	T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																												.	.																																																			.	.
Query SS confidence																												.	.																																																			.	.
Query Sequence		I	I	R	V	P	L	I	Q	G	F	N	A	D	E	T	S	V	K	A	I	T	D	F	A	A	D	.	.	E	L	H	V	G	E	I	H	F	L	P	Y	H	T	L	G	I	N	K	Y	H	L	L	N	L	P	Y	D	A	P	E	K	P	L	D	A	P	E	L	L	D	F	A	Q	Q	Y	A	C	Q	K	.	.
Query Conservation																												.	.																																																			.	.
Alig confidence						.	.	.	.	.	.	.																.	.										.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.																		.	.
Template Conservation						.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template Sequence		E	F	E	C	.	.	.	.	.	.	.	Y	D	T	S	H	L	Y	N	L	A	H	F	V	D	R	K	L	A	T	P	P	F	F	V	Q	T	.	.	.	.	.	.	.	.	.	.	.	.	V	F	G	L	L	G	G	I	.	.	.	.	G	P	H	P	E	D	L	A	H	X	R	R	T	A	D	R	L	F	G
Template Known Secondary structure						.	.	.	.	.	.	.		S													T	T		S		S	S						.	.	.	.	.	.	.	.	.	.	.	.			S		T	T	S		.	.	.	.																			G
Template Predicted Secondary structure						.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.
Template SS confidence
		169	170	.	.								.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.													.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
																										292	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	A	T	L	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	D	Y	V	W	S	I	L	G	A	G	R	H	Q	I	P	L	A	S	I	G	A	A	Q	G	A	N	V	R	V	G
Template Known Secondary structure		G	G									G	G	G										T	T	T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions