 |
Job Description | P75794 | Confidence | 91.60% | Date | Thu Jan 5 12:14:13 GMT 2012 |
Rank | 65 | Aligned Residues | 101 |
% Identity | 13% | Template | c3cf4A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:acetyl-coa decarboxylase/synthase alpha subunit; |
PDBTitle: structure of the codh component of the m. barkeri acds complex
|
Resolution | 2.00 Å |
|
 |
  |   |
49 | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . | . |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | L | C | L | E | G | C | E | L | C | A | K | A | A | P | E | V | I | E | . |
. |
. |
. |
. |
. |
. |
. |
R | A | L | N | G | L | L | I | H | R | E | K | L | T | P | E | H | L | T | A | L | T | D | C | C | P | T | Q | A | L | T | V | C | G | E | V | K | S | V | E | E | I | M | T | T | V | L | R | D | K | P | F | Y |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   | . |   |
|
|   |
|   |   |   |
|
|   |   |
|   |
|   |   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|
|   |   |
|
|   | . | . | . | . | . | . | . | . |   |
|   |
|   |   |
|
|
|   |
|   |   |   |   |   |   |   |
Template Sequence |   |
A | K | C | A | . |
D | C | G | A | C | L | L | A | C | P | E | E | I | D | I | P | E | A | M | G | F | A | K | K | G | D | F | S | Y | F | E | E | I | H | D | T | C | I | G | C | R | R | C | E | Q | V | C | K | K | . |
. |
. |
. |
. |
. |
. |
. |
E | I | P | I | L | N | V | I | E | K | I | A | Q | K | Q | I | A | E |
Template Known Secondary structure |   |
 |  |
|
| . |
|
|
|  |  |  |  |  |
| T | T |
|
|
|  |  |  |  |  |  |  |  |  | T | T |
| T |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| T | T | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  | T |  |  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  | . |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
415 | . | . | . | |
. | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . |
  |
  |   |
121 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 130 | . | |
. | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | R | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | G | G | L | T | L | S | G | . |
G | E | P | F | M | Q | P | E | M | A | M | A | L | L | Q | A | S | H | E | A | G | I | H | T | A | V | E |
Query Conservation |   |
  |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|   |
|
| . |
|
|
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
Alig confidence |   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |
|   |
|
|   |
|   |   |
|
|   |   |
|   |   |
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
E | K | G | L | M | R | A | G | R | G | Q | V | S | D | A | E | I | R | A | E | G | L | N | L | V | M | G | T | T | P | G | I | I | A | I | I | G | C | P | N | Y | A | G | G | T | K | D | V | Y | Y | I | A | E | E | F | L | K | R | N | F | I | V | V | T | T |
Template Known Secondary structure |   |
|
|  |  |  |  |
|
|
|
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S |
|
|  |  |  |  |
| S |
|
|
|
| S | S |
| S | S |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
486 | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|