Job Description P75794 Confidence 99.84% Date Thu Jan 5 12:14:13 GMT 2012 Rank 5 Aligned Residues 183 % Identity 25% Template c2z2uA_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:upf0026 protein mj0257; PDBTitle: crystal structure of archaeal tyw1 Resolution 2.40 Å

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		25	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		C	S	L	G	C	R	W	C	Q	.	N	P	E	S	R	A	R	T	Q	D	L	L	Y	D	A	R	L	C	L	E	G	C	E	L	C	A	K	A	A	P	E	V	I	E	R	A	L	N	G	L	L	I	H	R	E	K	L	T	P	E	H	L	T	A	L	T	D	C	C	P	T	Q	A	L	T	V	C	G	E	V
Query Conservation											.
Alig confidence											.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		C	T	P	S	V	I	W	C	Q	Q	N	S	Q	I	K	E	P	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W
Template Known Secondary structure				S		S	S			S					S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.																																																														.
		104	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.															.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure															.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query SS confidence															.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query Sequence		K	S	V	E	E	I	M	T	T	V	L	R	D	.	.	.	.	K	P	F	Y	D	R	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	T	L	S	G	.	G	E	P	F	M	Q	P	E	M	A	M	A	L	L	Q	A	S	H	E	A	G	I	H	T	A	V	E	T	C	L	H	V	P
Query Conservation															.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Alig confidence															.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.							.									.																								.
Template Conservation																																																									.																								.
Template Sequence		E	E	P	E	V	V	Y	E	K	I	L	A	M	H	K	R	I	I	M	G	Y	A	G	V	L	D	R	V	G	E	K	K	F	K	E	A	L	E	P	K	H	V	A	I	S	L	S	G	E	P	T	L	Y	P	Y	.	L	D	E	L	I	K	I	F	H	K	N	G	F	T	T	F	V	V	S	N	G	I	L	.
Template Known Secondary structure																					G	G	G	G	G													T	S								S	S	S		G	G	G	S	T	T	.											T	T									S			.
Template Predicted Secondary structure																																																									.																								.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.		.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	K	Y	I	A	P	S	L	P	Y	I	D	L	F	L	A	D	L	K	H	V	A	D	A	P	F	K	Q	W	T	D	G	N	A	A	R	V	L	D	N	L	K	K	L	A	A	A	G	K	K	I	I	I	R	V	P	L	I	Q	G	F	N	A	D	E	T	S	V	K	A	I	T	D	F	A	A	D	E	L	H
Query Conservation
Alig confidence											.	.																						.														.																													.	.	.	.
Template Conservation											.	.																						.														.																													.	.	.	.
Template Sequence		T	D	V	I	E	K	I	E	P	.	.	T	Q	L	Y	I	S	L	D	A	Y	D	L	D	S	Y	G	G	K	K	E	Y	.	W	E	S	I	L	N	T	L	D	I	L	K	E	.	K	K	R	T	C	I	R	T	T	L	I	R	G	Y	N	D	D	I	L	K	F	V	E	L	Y	E	R	A	.	.	.	.	D
Template Known Secondary structure											.	.	S									S	S	T	T	T								.												T	T	.	S	S	S									T	T	T	T			G	G	G	T								.	.	.	.	T
Template Predicted Secondary structure											.	.																						.														.																													.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.					.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	E	I	H	F	L	P	Y	H	T	L	G	I	N	K	Y	H	L	L	N	L	P	Y	D	A	P	E	K	P	L	D	A	P	E	L	L	D	F	A	Q	Q	Y	A	C	Q	K	G	L	T	A	T
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	H	F	I	E	L	K	S	Y	M	D	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	H	D	E	I	L	K	L	A	K	M	L	D	E	N	S	S	Y	K	L	I
Template Known Secondary structure			S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T	S	S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.																			.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions