 |
Job Description | P75794 | Confidence | 57.73% | Date | Thu Jan 5 12:14:13 GMT 2012 |
Rank | 125 | Aligned Residues | 56 |
% Identity | 18% | Template | c2hl2A_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:threonyl-trna synthetase; |
PDBTitle: crystal structure of the editing domain of threonyl-trna2 synthetase from pyrococcus abyssi in complex with an3 analog of seryladenylate
|
Resolution | 2.60 Å |
|
 |
  |   |
229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | T | S | V | K | A | I | T | D | F | A | A | D | E | L | H | V | G | E | I | H | F | L | P | Y | H | T | L | G | I | N | K | Y | H | L | L | N | L | P | Y | D | A | P | E | K | P | L | D | A | P | E | L | L | D | F | A | Q | Q | Y | A | C | Q | K | G | L | T | A | T |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |
|   |
|   | . |   |   |   |   |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |   |   |
|
|   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |
|
|   |
Template Sequence |   |
L | K | A | I | E | E | I | S | K | V | A | E | Q | V | . |
K | A | E | N | V | F | V | Y | P | F | A | H | L | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | E | L | A | K | P | S | V | A | M | D | I | L | N | R | V | Y | Q | G | L | K | E | R | G | F | N | V | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
|
|  |  |  |  |  |  |
| T | T | S |
| . | . | . | . | . | . | . | . | . | . | . | S | S | B |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|