Return to main results Retrieve Phyre Job Id

Job DescriptionP75794
Confidence98.16%DateThu Jan 5 12:14:13 GMT 2012
Rank16Aligned Residues106
% Identity17%Templatec1gx7A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:periplasmic [fe] hydrogenase large subunit; PDBTitle: best model of the electron transfer complex between2 cytochrome c3 and [fe]-hydrogenase
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60........ .70.........80.........90.........100.........110.........120..
Predicted Secondary structure 













.






















Query SS confidence 
























.





















































Query Sequence  LLYDARLCLEGCELCAKAAPEVIER. ALNGLLIHREKLTPEHLTALTDCCPTQALTVCGEVKSVEEIMTTVLRDKPFYDR
Query Conservation         
   

 
          .                
  
   
   
            
   
         
Alig confidence 








.














.

































..
















.
Template Conservation 
 

  


. 
  

  

  

          
   


 

 


 

  

     ..    
   
       
.
Template Sequence  VQIDEAKCI. GCDTCSQYCPTAAIFGEMGEPHSIPHIEACINCGQCLTHCPENAIYEAQS. . WVPEVEKKLKDGKVKCI.
Template Known Secondary structure 
TTS

.S

SGGGG
TTS

B

TTS

B


TTTS
S

SSSTTSTT

S

..
TTTS.
Template Predicted Secondary structure 


.






























..



.
Template SS confidence 















































































   28.30...... ...40.........50.........60.........70.........80...... ...90.........100...
 
   123......130.........140 .........150.........160
Predicted Secondary structure 





............




Query SS confidence 

















. . . . . . . . . . . .



















Query Sequence  SGGGLTLSGGEPFMQPEM. . . . . . . . . . . . AMALLQASHEAGIHTAVETC
Query Conservation     


 




 
  
 ............
       
  
  
 
 

Alig confidence  ....



...






............



















Template Conservation  ....  

...
     

              
   

 


  
 


Template Sequence  . . . . AMPA. . . PAVRYALGDAFGMPVGSVTTGKMLAALQKLGFAHCWDTE
Template Known Secondary structure  ....

...GGGGT

SSS
TTT


B

Template Predicted Secondary structure  ....
...













Template SS confidence 

















































   104... ..110.........120.........130.........140......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions