Job Description P71239 Confidence 95.12% Date Thu Jan 5 12:12:31 GMT 2012 Rank 21 Aligned Residues 175 % Identity 12% Template d1vh3a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.70

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	I	I	T	V	A	F	R	N	L	E	G	I	V	K	T	H	A	S	L	A	H	L	A	Q	V	E	D	I	S	F	E	W	I	V	V	D	G	G	S	N	D	G	T	R	E	Y	L	E	N	L	N	G	I	F	N	L	R	F	V	S	E	P	D	N	G	I	Y	D	A	M	N	K	G	I	A	M	A	Q
Query Conservation
Alig confidence										.	.	.																	.	.	.	.	.									.	.
Template Conservation										.	.	.																	.	.	.	.	.									.	.
Template Sequence		F	T	V	I	I	P	A	R	.	.	.	P	X	I	Q	H	V	F	E	K	A	L	Q	S	G	A	S	.	.	.	.	.	R	V	I	I	A	T	D	N	.	.	E	N	V	A	D	V	A	K	S	F	G	A	E	V	C	X	T	S	V	N	H	N	S	G	T	E	R	L	A	E	V	V	E	K	L	A	I	P
Template Known Secondary structure										.	.	.													T	T		S	.	.	.	.	.							S		.	.										T	T								S			S	S												T	T
Template Predicted Secondary structure										.	.	.																	.	.	.	.	.									.	.
Template SS confidence
		3	.	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.						.	.	.	30	.	.	.	.			.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		83	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure													.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	F	A	L	F	L	N	S	G	D	.	.	I	F	H	Q	N	A	A	N	F	V	R	K	L	K	M	Q	K	D	N	V	M	I	T	G	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	D	F	G	D	G	H	K	I	K	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	N	E	I	I	V	N	I	Q	G	D	E	P	L	I	P	P	V	I	V	R	Q	V	A	D	N	L	A	K	F	N	V	N	X	A	S	L	A	V	K	I	H	D	A	E	E	L	F	N	P	N	A	V	K	V	L	T	D	K	D	G	Y	V	L	Y	F	S	R	S	V	I	P	Y	D	R	D	Q	F	X	N
Template Known Secondary structure		T	T	S							T	T		S																	T	T		S															T		T	T	S							T	T	S	B						S	S		S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
			132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure		.																																		.	.
Query SS confidence		.																																		.	.
Query Sequence		.	S	A	K	P	G	W	Y	I	Y	H	S	L	P	A	S	H	Q	A	I	F	F	P	V	S	G	L	K	K	W	R	Y	D	L	.	.	E	Y	K	V	S	S	D	Y	A	L	A	A	K	M	Y	K	A	G	Y	A	F	K	K	L
Query Conservation		.																																		.	.
Alig confidence		.																																		.	.											.
Template Conservation																																																.
Template Sequence		L	Q	D	V	Q	K	V	Q	L	S	D	A	Y	L	R	H	I	G	I	Y	A	Y	R	A	G	F	I	K	Q	Y	V	Q	W	A	P	T	Q	L	E	N	L	E	K	L	E	Q	.	L	R	V	L	Y	N	G	E	R	I	H	V	E
Template Known Secondary structure					T	T	T					S																						S										T		T	T	.						T	T
Template Predicted Secondary structure																																																.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions