Job Description P71239 Confidence 96.45% Date Thu Jan 5 12:12:31 GMT 2012 Rank 18 Aligned Residues 170 % Identity 10% Template c2px7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate PDBTitle: crystal structure of 2-c-methyl-d-erythritol 4-phosphate2 cytidylyltransferase from thermus thermophilus hb8 Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.										.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.
Query Sequence		M	L	L	S	I	I	T	V	.	.	.	.	.	.	.	.	.	A	F	R	N	L	E	G	I	V	K	T	H	A	S	L	A	H	L	A	Q	V	E	D	I	S	F	E	W	I	V	V	D	G	G	S	N	D	G	T	R	E	Y	L	E	N	L	N	G	I	F	N	L	R	F	V	S	E	P	D	N	G	I	Y
Query Conservation										.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.																				.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	E	V	S	V	L	I	P	A	A	G	G	P	K	A	F	L	Q	V	G	G	R	T	L	L	E	W	T	L	A	A	F	R	D	A	A	.	.	.	.	.	E	V	L	V	A	L	P	P	G	A	E	P	.	.	.	.	.	.	.	.	.	.	.	P	K	G	L	G	A	V	F	L	E	G	G	A	T	R	Q
Template Known Secondary structure															G	G	G		B		S	S	S	B									T	T	T		S	.	.	.	.	.								T	T				.	.	.	.	.	.	.	.	.	.	.		T	T		S								S	S
Template Predicted Secondary structure																																						.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.												.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		D	A	M	N	K	G	I	A	M	A	Q	G	K	F	A	L	F	L	N	S	G	D	.	I	F	H	Q	N	A	A	N	F	V	R	K	L	K	M	Q	K	D	N	V	M	I	T	G	D	A	L	L	D	F	G	D	G	H	K	I	K	R	S	A	K	P	G	W	Y	I	Y	H	S	L	P	A	S	H	Q	A	I
Query Conservation																								.
Alig confidence																								.																												.	.	.
Template Conservation																																																				.	.	.
Template Sequence		A	S	V	A	R	L	L	E	A	A	S	L	P	L	V	L	V	H	D	V	A	R	P	F	V	S	R	G	L	V	A	R	V	L	E	A	A	Q	R	S	G	A	A	V	P	V	L	P	V	P	.	.	.	D	T	L	M	A	P	E	G	E	A	Y	G	R	V	V	P	R	E	A	F	R	L	V	Q	T	P	Q
Template Known Secondary structure													S	S							T	T																				S										.	.	.	S							S	S	S							G	G	G						S
Template Predicted Secondary structure																																																				.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.				.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	P	V	S	G	L	K	K	W	R	Y	D	L	E	Y	K	V	S	S	D	Y	A	L	A	A	K	M	Y	K	A	G	Y	A	F	K	K	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	F	F	T	A	L	L	R	E	A	H	A	Y	A	R	R	K	G	L	E	A	S	D	D	A	Q	L	V	Q	A	L	G	Y	P	V	A	L	V	E
Template Known Secondary structure																			T				S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions