Job Description P71239 Confidence 15.31% Date Thu Jan 5 12:12:31 GMT 2012 Rank 63 Aligned Residues 104 % Identity 15% Template c2lciA_ PDB info PDB header:de novo protein Chain: A: PDB Molecule:protein or36; PDBTitle: solution nmr structure of de novo designed protein, p-loop ntpase2 fold, northeast structural genomics consortium target or36 (casd3 target) Resolution UNK

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	L	S	I	I	T	V	A	F	R	N	L	E	G	I	V	K	T	H	A	S	L	A	H	L	A	Q	V	E	D	I	S	F	E	W	I	V	V	D	G	G	S	N	D	G	T	R	E	Y	L	E	N	L	N	G	I	F	N	L	R	F	V	S	E	P	D	N	G	I	Y	D	A	M	N	K	G	I	A	M
Query Conservation
Alig confidence											.																				.	.	.	.	.	.	.	.
Template Conservation											.																				.	.	.	.	.	.	.	.
Template Sequence		M	K	I	L	I	L	I	N	T	.	N	N	D	E	L	I	K	K	I	K	K	E	V	E	N	Q	G	Y	Q	.	.	.	.	.	.	.	.	V	R	D	V	N	D	S	D	E	L	K	K	E	M	K	K	L	A	E	E	K	N	F	E	K	I	L	I	I	S	N	D	K	Q	L	L	K	E	M	L	E	L	I
Template Known Secondary structure											.	S												T	T	T	T	T			.	.	.	.	.	.	.	.						S																S									S
Template Predicted Secondary structure											.																				.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.									.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	G	K	F	A	L	F	L	N	S	G	D	I	F	H	Q	N	A	A	N	F	V	R	K	L	K	M	Q	K	D	N	V	M
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		S	K	L	G	Y	K	V	F	L	L	L	Q	D	Q	.	D	E	N	E	L	E	E	F	K	R	K	I	E	S	Q	G	Y	E	V
Template Known Secondary structure					T										S	.														T	T	T
Template Predicted Secondary structure																.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions