Job Description P71239 Confidence 44.74% Date Thu Jan 5 12:12:31 GMT 2012 Rank 42 Aligned Residues 73 % Identity 12% Template c2gamA_ PDB info PDB header:transferase Chain: A: PDB Molecule:beta-1,6-n-acetylglucosaminyltransferase; PDBTitle: x-ray crystal structure of murine leukocyte-type core 2 b1,2 6-n-acetylglucosaminyltransferase (c2gnt-l) in complex3 with galb1,3galnac Resolution 2.70 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	I	I	T	V	A	F	R	N	L	E	G	I	V	K	T	H	A	S	L	A	H	L	A	Q	V	E	D	I	S	F	E	W	I	V	V	D	G	G	S	N	D	G	T	R	E	Y	L	E	N	L	N	G	I	F	N	L	R	F	V	S	E	P	D	N	G	I	Y	D	A	M	N	K	G	I	A	M
Query Conservation
Alig confidence																							.	.	.	.								.
Template Conservation																							.	.	.	.								.
Template Sequence		I	A	Y	S	I	V	V	H	H	K	I	E	M	L	D	R	L	L	R	A	I	.	.	.	.	Y	M	P	Q	N	F	Y	.	C	I	H	V	D	R	K	A	E	E	S	F	L	A	A	V	Q	G	I	A	S	C	F	D	N	V	F	V	A	S	Q	L	E	S	V	V	Y	A	S	W	T	R	V	K	A
Template Known Secondary structure									S	S													.	.	.	.			T	T	S			.						T	T	S														T		T	T					S	S						T	T	S
Template Predicted Secondary structure																							.	.	.	.								.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.					.	.	.	.	.	.	150		.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions