Job Description P0AEN1 Confidence 99.94% Date Thu Jan 5 11:23:45 GMT 2012 Rank 29 Aligned Residues 213 % Identity 18% Template c2qtzA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:methionine synthase reductase; PDBTitle: crystal structure of the nadp+-bound fad-containing fnr-like module of2 human methionine synthase reductase Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.						.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.												.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.												.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	C	K	V	T	S	V	E	A	I	T	D	.	.	.	.	.	T	V	Y	R	V	R	I	V	P	D	A	.	A	F	S	F	R	A	G	Q	Y	L	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.												.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.												.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	Q	V	P	I	S	K	A	V	Q	L	T	T	N	D	A	I	K	T	T	L	L	V	E	L	D	I	S	N	T	D	F	S	Y	Q	P	G	D	A	F	S	V	I	C	P	N	S	D	S	E	V	Q	S	L	L	Q	R	L	Q	L	E	D	K	R	E	H	V	L	L	K	I	K	A	D	T	K	K	K	G	A
Template Known Secondary structure													S		T	T		S	S										T	T	S						T	T																					T	T		G	G	G	T	T								T	T				T	T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	P	Q	H	I	P	A	G	C	S	L	Q	F	I	F	T	W	C	L	E	I	R	A	I	P	K	K	A	F	L	R	A	L	V	D	Y	T	S	D	S	A	E	K	R	R	L	Q	E	L	C	S	K	Q	G	A	A	D	Y	S	R	F	V	R	D	A	A	C	L	L	D	L	L	L	A	F	P	S	C	Q
Template Known Secondary structure					T	T	S		T	T										T	B		T	T	S												T	T	B		S												S	S	T	T								T	T												S	T	T	B
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.
										40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.											.	.	.	.	.	.	.	.	80	.	.	.	.				.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																	.																	.	.	.	.	.	.	.	.	.	.														.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																	.																	.	.	.	.	.	.	.	.	.	.														.	.	.
Query Sequence		.	.	.	.	.	.	.	.	V	M	D	E	R	D	K	R	P	F	S	M	A	S	T	P	.	D	E	K	G	F	I	E	L	H	I	G	A	S	E	I	N	.	.	.	.	.	.	.	.	.	.	L	Y	A	K	A	V	M	D	R	I	L	K	D	.	.	.	H	Q	I	V	V	D	I	P	H	G	E	A	W
Query Conservation		.	.	.	.	.	.	.	.																	.																	.	.	.	.	.	.	.	.	.	.														.	.	.
Alig confidence		.	.	.	.	.	.	.	.																	.																	.	.	.	.	.	.	.	.	.	.														.	.	.
Template Conservation
Template Sequence		P	P	L	S	L	L	L	E	H	L	P	K	L	Q	P	R	P	Y	S	C	A	S	S	S	L	F	H	P	G	K	L	H	F	V	F	N	I	V	E	F	L	S	T	A	T	T	E	V	L	R	K	G	V	C	T	G	W	L	A	L	L	V	A	S	V	L	A	P	K	I	S	I	F	P	R	T	T	N	S	F
Template Known Secondary structure													B										S		T	T	T	S	T	T														S		S	S		S														G	G	G	T											S
Template Predicted Secondary structure
Template SS confidence
		436	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		98	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.																												.	.	.	.	.	.																			.
Query SS confidence					.																												.	.	.	.	.	.																			.
Query Sequence		L	R	D	.	D	E	E	R	P	M	I	L	I	A	G	G	T	G	F	S	Y	A	R	S	I	L	L	T	A	L	A	.	.	.	.	.	.	R	N	P	N	R	D	I	T	I	Y	W	G	G	R	E	E	Q	H	.	L	Y	D	L	C	E	L	E	A	L	S	L	K	H	P	G	L	Q	V	V	P	V	V	E
Query Conservation					.																												.	.	.	.	.	.																			.
Alig confidence					.																												.	.	.	.	.	.																			.
Template Conservation
Template Sequence		H	L	P	D	D	P	S	I	P	I	I	M	V	G	P	G	T	G	I	A	P	F	I	G	F	L	Q	H	R	E	K	L	Q	E	Q	H	P	D	G	N	F	G	A	M	W	L	F	F	G	C	R	H	K	D	R	D	Y	L	F	R	K	E	L	R	H	F	L	K	H	G	I	L	T	H	L	K	V	S	F	S
Template Known Secondary structure					S	S	T	T	S								G	G	G	G																	S	T	T													S		T	T	T			T	T										T	T	S	S								S
Template Predicted Secondary structure
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
		170	.	.	.	.	.	.	.	.	.	180	.	.			.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure															.	.																						.
Query SS confidence															.	.																						.
Query Sequence		Q	P	E	A	G	W	R	G	R	T	G	T	V	.	.	L	T	A	V	L	Q	D	H	G	T	L	A	E	H	D	I	Y	I	A	G	R	.	F	E	M	A	K	I	A	R	D	L	F	C	S
Query Conservation															.	.																						.
Alig confidence															.	.																						.
Template Conservation
Template Sequence		R	D	A	P	P	A	K	Y	V	Q	D	N	I	Q	L	H	G	Q	Q	V	A	R	I	L	L	Q	E	N	G	H	I	Y	V	C	G	D	A	K	N	M	A	K	D	V	H	D	A	L	V	Q
Template Known Secondary structure		S							S								T											S									S
Template Predicted Secondary structure
Template SS confidence
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions