Job Description P0AEN1 Confidence 99.96% Date Thu Jan 5 11:23:45 GMT 2012 Rank 23 Aligned Residues 209 % Identity 20% Template c1ddiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sulfite reductase [nadph] flavoprotein alpha- PDBTitle: crystal structure of sir-fp60 Resolution 2.51 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.						.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	C	K	V	T	S	V	E	A	I	T	D	.	.	.	.	.	T	V	Y	R	V	R	I	V	P	D	A	.	A	F	S	F	R	A	G	Q	Y	L	M	V	V	M	D	E	R	D	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation															.	.	.	.	.												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.												.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	V	A	S	L	S	V	N	Q	K	I	T	G	R	N	S	E	K	D	V	R	H	I	E	I	D	L	G	D	S	G	L	R	Y	Q	P	G	D	A	L	G	V	W	Y	Q	N	D	P	A	L	V	K	E	L	V	E	L	L	W	L	K	G	D	E	P	V	T	V	E	G	K	T	L	P	L	N	E	A	L	Q
Template Known Secondary structure													S		T	T		S											T	T	S						T	T																					T	T			T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
																																																																							47	.	.	50	.	.	.	.	.		.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	P	F	S	M	A	S	T	P	.	D
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation
Template Sequence		W	H	F	E	L	T	V	N	T	A	N	I	V	E	N	Y	A	T	L	T	R	S	E	T	L	L	P	L	V	G	D	K	A	K	L	Q	H	Y	A	A	T	T	P	I	V	D	M	V	R	F	S	P	A	Q	L	D	A	E	A	L	I	N	L	L	R	P	L	T	P	R	L	Y	S	I	A	S	S	Q	A	E
Template Known Secondary structure			T	B			S																	T	T	T	G	G	G	T	T												S									S													S		B												T	T	T
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.									.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.																																	.
Query SS confidence														.	.	.	.	.	.	.	.																																	.
Query Sequence		E	K	G	F	I	E	L	H	I	G	A	S	.	.	.	.	.	.	.	.	E	I	N	L	Y	A	K	A	V	M	D	R	I	L	K	D	H	Q	I	V	V	D	I	P	H	G	E	A	W	L	R	D	.	D	E	E	R	P	M	I	L	I	A	G	G	T	G	F	S	Y	A	R	S	I	L	L	T	A	L	A
Query Conservation														.	.	.	.	.	.	.	.																																	.
Alig confidence														.	.	.	.	.	.	.	.																																	.
Template Conservation
Template Sequence		V	E	N	E	V	H	V	T	V	G	V	V	R	Y	D	V	E	G	R	A	R	A	G	G	A	S	S	F	L	A	D	R	V	E	E	E	G	E	V	R	V	F	I	E	H	N	D	N	F	R	L	P	A	N	P	E	T	P	V	I	M	I	G	P	G	T	G	I	A	P	F	R	A	F	M	Q	Q	R	A	A
Template Known Secondary structure		S		S														T	T														S	S		S	S											T	T	S				S	S	T	T	S								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.		.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.						.	.	.	.	.	.	200	.
Predicted Secondary structure																				.																																																	.	.	.	.	.
Query SS confidence																				.																																																	.	.	.	.	.
Query Sequence		R	N	P	N	R	D	I	T	I	Y	W	G	G	R	E	E	Q	H	.	L	Y	D	L	C	E	L	E	A	L	S	L	K	H	P	G	L	Q	V	V	P	V	V	E	Q	P	E	A	G	W	R	G	R	T	G	T	V	L	T	A	V	L	Q	D	H	G	T	L	.	.	.	.	.	A	E	H	D	I	Y	I	A
Query Conservation																				.																																																	.	.	.	.	.
Alig confidence																				.																													.	.	.	.																	.	.	.	.	.
Template Conservation																																																	.	.	.	.
Template Sequence		D	E	A	P	G	K	N	W	L	F	F	G	N	P	H	F	T	E	D	F	L	Y	Q	V	E	W	Q	R	Y	V	K	E	G	V	L	T	R	I	D	L	A	W	S	R	D	Q	K	.	.	.	.	E	K	V	Y	V	Q	D	K	L	R	E	Q	G	A	E	L	W	R	W	I	N	D	G	A	H	I	Y	V	C
Template Known Secondary structure		T	T			S									S							T	T										T	T	S	S								T	T	S	S	S	.	.	.	.	S											T										T	T
Template Predicted Secondary structure																																																	.	.	.	.
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.					.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.
		202	.		.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		G	R	.	F	E	M	A	K	I	A	R	D	L	F	C	S
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		G	D	A	N	R	M	A	K	D	V	E	Q	A	L	L	E
Template Known Secondary structure				T	T	T
Template Predicted Secondary structure
Template SS confidence
		553	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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