Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEN1
Confidence100.00%DateThu Jan 5 11:23:45 GMT 2012
Rank6Aligned Residues223
% Identity20%Templatec1cqxB_
PDB info PDB header:lipid binding proteinChain: B: PDB Molecule:flavohemoprotein; PDBTitle: crystal structure of the flavohemoglobin from alcaligenes eutrophus at2 1.75 a resolution
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20........ .30.........40. ........50.........60.........70..
Predicted Secondary structure 







...







.....














....
Query SS confidence 























. . .












. . . . .






























. . . .
Query Sequence  SCKVTSVEAITDTVYRVRIVPDAA. . . FSFRAGQYLMVVM. . . . . DERDKRPFSMASTPDEKGFIELHIGASEINL. . . .
Query Conservation   
 
     
      
 
     ...    


 
 
  .....     
 


                     ....
Alig confidence 























...












.....















.













....
Template Conservation     
      
  
    
            




 
    
       
 




 
  .  
 
 

         
Template Sequence  TFVIREKRPESDVITSFILEPADGGPVVNFEPGQYTSVAIDVPALGLQQIRQYSLSDMPNG. RTYRISVKREGGGPQPPG
Template Known Secondary structure 
SSSTT







TT
TTTT

S


S.S


S
SSS


Template Predicted Secondary structure 



























.








Template SS confidence 















































































   156...160.........170.........180.........190.........200.........210...... ...220.........230....
 
   73......80.........90.........100.........110.........120.........130.........140.........150.
Predicted Secondary structure  .









































Query SS confidence  .














































































Query Sequence  . YAKAVMDRILKDHQIVVDIPHGEAWLRDDEERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLCE
Query Conservation  .           
                      
 



 

 
  
 
           
 
               
Alig confidence  .


























































.


















Template Conservation    
  
   
  

 
 
  
 
 
 
       






 

 
              . 
 
    
          
Template Sequence  YVSNLLHDHVNVGDQVKLAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQAPPR. QVVFVHGARNSAVHAMRDR
Template Known Secondary structure 

TT



B
S
S

TT

S
SS

T
SS

.


TTS
Template Predicted Secondary structure 























.



Template SS confidence 















































































   235....240.........250.........260.........270.........280.........290.... .....300.........310...
 
   152.......160.........170...... ...180.........190.........200.........210.........220......
Predicted Secondary structure 










.....

















Query SS confidence 
























. . . . .

















































Query Sequence  LEALSLKHPGLQVVPVVEQPEAGWR. . . . . GRTGTVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSERNAREDRLF
Query Conservation 
  
             
       .....   
                 
 



          
    
     
 
Alig confidence 
























.....





































.










Template Conservation 
  
                                    
          





  
   
   
.   

    

Template Sequence  LREAAKTYENLDLFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKSILLPDADYYICGPIPFMRMQHDAL. KNLGIHEARIH
Template Known Secondary structure 
TTSS

TT

BTTTBSSS

TTTS

TT
SS.TTT

GGG
Template Predicted Secondary structure 





























.



Template SS confidence 















































































   314.....320.........330.........340.........350.........360.........370.........380. ........390..
 
   227..230
Predicted Secondary structure 
Query SS confidence 



Query Sequence  GDAF
Query Conservation   
 
Alig confidence 



Template Conservation   
 
Template Sequence  YEVF
Template Known Secondary structure 


Template Predicted Secondary structure 

Template SS confidence 



   393...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions