Job Description P0AEN1 Confidence 100.00% Date Thu Jan 5 11:23:45 GMT 2012 Rank 19 Aligned Residues 226 % Identity 20% Template c1cneA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nitrate reductase; PDBTitle: structural studies on corn nitrate reductase: refined2 structure of the cytochrome b reductase fragment at 2.53 angstroms, its adp complex and an active site mutant and4 modeling of the cytochrome b domain Resolution 3.00 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.									.
Predicted Secondary structure																												.	.	.																	.	.	.																								.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.																	.	.	.																								.	.	.	.	.	.	.	.
Query Sequence		T	L	S	C	K	V	T	S	V	E	A	I	T	D	T	V	Y	R	V	R	I	V	P	D	A	A	.	.	.	F	S	F	R	A	G	Q	Y	L	M	V	V	M	D	E	R	.	.	.	D	K	R	P	F	S	M	A	S	T	P	D	E	K	G	F	I	E	L	H	I	G	A	.	.	.	.	.	.	.	.	S
Query Conservation																												.	.	.																	.	.	.																								.	.	.	.	.	.	.	.
Alig confidence																												.	.	.																	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	I	H	C	R	L	V	A	K	K	E	L	S	R	D	V	R	L	F	R	F	S	L	P	S	P	D	Q	V	L	G	L	P	I	G	K	H	I	F	V	C	A	T	I	E	G	K	L	C	M	R	A	Y	T	P	T	S	M	V	D	E	I	G	H	F	D	L	L	V	K	V	Y	F	K	N	E	H	P	K	F
Template Known Secondary structure														B	T	T									S	S	T	T	S						T	T			B			B			B	T	T	B						B				S		T	T			S											S	S	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100											.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.																																		.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.																																		.	.
Query Sequence		E	I	N	L	Y	A	K	A	V	M	D	R	I	L	K	D	H	Q	I	V	V	D	I	P	H	G	E	A	W	L	R	D	.	.	.	.	.	.	.	.	.	.	D	E	E	R	P	M	I	L	I	A	G	G	T	G	F	S	Y	A	R	S	I	L	L	T	A	L	A	R	N	P	N	R	D	.	.	I	T	I
Query Conservation																																		.	.	.	.	.	.	.	.	.	.																																		.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation
Template Sequence		P	N	G	G	L	M	T	Q	Y	L	D	S	L	P	V	G	S	Y	I	D	V	K	G	P	L	G	H	V	E	Y	T	G	R	G	S	F	V	I	N	G	K	Q	R	N	A	R	R	L	A	M	I	C	G	G	S	G	I	T	P	M	Y	Q	I	I	Q	A	V	L	R	D	Q	P	E	D	H	T	E	M	H	L
Template Known Secondary structure		T	T											S		T	T				B							S					S	S	S					S	S	S					S								S	S		S													S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170					.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.			.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																																				.	.	.	.																								.	.
Query SS confidence																																				.	.	.	.																								.	.
Query Sequence		Y	W	G	G	R	E	E	Q	H	L	Y	D	L	C	E	L	E	A	L	S	L	K	H	P	G	L	Q	V	V	P	V	V	E	Q	.	.	.	.	P	E	A	G	W	R	G	R	T	G	T	V	L	T	A	V	L	Q	D	H	G	T	L	.	.	A	E	H	D	I	Y	I	A	G	R	F	E	M	A	K	I	A
Query Conservation																																				.	.	.	.																								.	.
Alig confidence																																				.	.	.	.																								.	.
Template Conservation
Template Sequence		V	Y	A	N	R	T	E	D	D	I	L	L	R	D	E	L	D	R	W	A	A	E	Y	P	D	R	L	K	V	W	Y	V	I	D	Q	V	K	R	P	E	E	G	W	K	Y	S	V	G	F	V	T	E	A	V	L	R	E	H	V	P	E	G	G	D	D	T	L	A	L	A	S	G	P	P	P	M	I	Q	F	A
Template Known Secondary structure						S	B	T	T			T	T	S					T					S	T	T	T								S	B		S		T	T	T				S	B		S	S								T	T	S				T	T	T							S		T					T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	L	F	C	S	E	R	N	A	R	E	D	R	L	F	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	S	P	N	L	E	K	M	K	Y	D	M	A	N	S	F	V	V
Template Known Secondary structure		T	S	S					T	T			S	T	T	T	B
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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