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Job DescriptionP23898
Confidence100.00%DateThu Jan 5 11:40:30 GMT 2012
Rank7Aligned Residues131
% Identity27%Templatec3pbiA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:invasion protein; PDBTitle: structure of the peptidoglycan hydrolase ripb (rv1478) from2 mycobacterium tuberculosis at 1.6 resolution
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50........ .60.........70.........80...
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Query Sequence  SHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRR. . . . . . . . . . . . . GVDCSGFVVVTMRDRFDLQLPRETK
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Template Sequence  LGGPTGASRIPRANARQAVEYVIRRAGSQMGVPYSWGGGSLQGPSKGVDSGANTVGFDCSGLVRYAFAG. VGVLIPRFSG
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GGGS
GGGTTT
BB
TT


SSS

SGGGTT
B
T.TT



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   85....90.........100.........110.........120.........130.........140.........150... ......160...
 
   84.....90.........100.........110.........120.........130.. .......140.........150....
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Query Sequence  QQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYDTNNQFIHASTSK. GVMRSSLDNVYWQKNFWQARRI
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Template Sequence  DQYNAGRHVPPAEAKRGDLIFY. . . GPGGGQHVTLYLGNGQMLEASGSAGKVTVSPVRKAGMTPF. . . VTRI
Template Known Secondary structure  TTSS
GGG

TT
...SGGG
STTTTTT


TTB
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   173......180.........190.... .....200.........210.........220.........230.... ....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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