Job Description P23898 Confidence 99.88% Date Thu Jan 5 11:40:30 GMT 2012 Rank 10 Aligned Residues 98 % Identity 26% Template c3m1uB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative gamma-d-glutamyl-l-diamino acid endopeptidase; PDBTitle: crystal structure of a putative gamma-d-glutamyl-l-diamino acid2 endopeptidase (dvu_0896) from desulfovibrio vulgaris hildenborough at3 1.75 a resolution Resolution 1.75 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	I	A	G	L	N	D	Q	L	Q	S	W	H	G	T	P	Y	R	Y	G	G	M	T	R	R	G	V	D	C	S	G	F	V	V	V	T	M	R	D	R	F	D	L	Q	L	P	R	E	T	K	Q	Q	A	S	I	G	T	Q	I	D	K	D	E	L	L	P	G	D	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.															.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.															.
Template Sequence		T	P	G	N	X	A	E	L	G	N	R	X	X	G	Q	P	Y	G	W	G	G	L	Y	E	.	D	R	D	C	S	S	T	L	R	D	L	F	T	P	.	F	G	L	W	L	P	R	N	S	A	S	Q	A	K	A	G	R	Y	V	D	I	A	K	L	D	A	D	D	K	E	A	R	I	V	A	E	G	V	P	F
Template Known Secondary structure														T	T		B	B		G	G	G	G	G	G	.		B											G	G	.	G	T					S	S					T	T	S	S						T	T	S															T	T
Template Predicted Secondary structure																										.															.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.	.	.	340	.	.	.		.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
				102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.															.	.	.	.	.	.	.	.	140
Predicted Secondary structure		.	.																								.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																								.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	L	V	F	F	K	T	G	S	G	Q	N	G	L	H	V	G	I	Y	D	T	N	N	Q	.	.	.	.	F	I	H	A	S	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	V	M	R	S	S	L	D
Query Conservation		.	.																								.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.					.	.	.	.	.	.	.													.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.
Template Sequence		X	T	L	L	W	L	.	.	.	.	.	.	.	R	G	H	I	T	L	Y	L	G	L	H	E	G	Q	A	A	X	F	H	N	X	W	G	I	R	T	H	R	G	G	V	E	G	R	Y	V	L	G	R	A	V	V	T	S	T	R
Template Known Secondary structure		S						.	.	.	.	.	.	.	T	T										T	T																T	T															S
Template Predicted Secondary structure								.	.	.	.	.	.	.
Template SS confidence
		384	.	.	.	.	.								390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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