Return to main results Retrieve Phyre Job Id

Job DescriptionP23898
Confidence100.00%DateThu Jan 5 11:40:30 GMT 2012
Rank6Aligned Residues132
% Identity23%Templatec2xivA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:hypothetical invasion protein; PDBTitle: structure of rv1477, hypothetical invasion protein of2 mycobacterium tuberculosis
Resolution1.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40.........50........ .60.........70.........80...
Predicted Secondary structure 

























.............








Query SS confidence 









































. . . . . . . . . . . . .
























Query Sequence  SHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRR. . . . . . . . . . . . . GVDCSGFVVVTMRDRFDLQLPRETK
Query Conservation                       

  
   

 

  

    .............
 





  

    

 


 
 
Alig confidence 









































.............













.









Template Conservation                       

  
   

 

 


                 
 



 
  
   . 

 


 
 
Template Sequence  APAGSAQGRIPRVYGRQASEYVIRRGXSQIGVPYSWGGGNAAGPSKGIDSGAGTVGFDCSGLVLYSFAG. VGIKLPHYSG
Template Known Secondary structure 

TT
S

SS
GGGTTTT
BB
TT

BTTB

SGGGTT
B
T.TT



BS
Template Predicted Secondary structure 







































.







Template SS confidence 















































































   325....330.........340.........350.........360.........370.........380.........390... ......400...
 
   84.....90.........100.........110.........120.........130 .........140.........150....
Predicted Secondary structure 




















.








Query SS confidence 














































.























Query Sequence  QQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYDTNNQFIHAST. SKGVMRSSLDNVYWQKNFWQARRI
Query Conservation                  





         




 
 
  


  .  

 
  
   

      
 

Alig confidence 





















...





















.

















..



Template Conservation   
   
  
      





 ...      




 
 
  


   
  
            

.. 
 
Template Sequence  SQYNLGRKIPSSQXRRGDVIFY. . . GPNGSQHVTIYLGNGQXLEAPDVGLKVRVAPVRTAGXTPYV. . VRYI
Template Known Secondary structure  TTSSGGG

TT
...SGGG
STT

STT
BS


TTB
S..SS
Template Predicted Secondary structure 











...




















..
Template SS confidence 







































































   404.....410.........420..... ....430.........440.........450.........460...... ...470
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions