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Job DescriptionP32662
Confidence98.64%DateThu Jan 5 11:49:55 GMT 2012
Rank107Aligned Residues176
% Identity18%Templated2vkqa1
SCOP infoHAD-like HAD-like Pyrimidine 5'-nucleotidase (UMPH-1)
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910........ .20.........30...... ...40.........50.........60....
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Query Sequence  GVAFDLDGTL. . . . . . . . . . . . . . . . VDSAPGLAAAVDMALYAL. . . . . . . . ELPVAGEERVITWIGNGADVLMERALTW
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Template Sequence  QIITDFDMTLSRFSYKGKRCPTCHNIIDNCKLVTDECRKKLLQLKEKYYAIEVDPVLTVEEKYPYMVEWYTKSHGLLVQQ
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TTTTB
STT


TSTTS
T
SSS
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   34.....40.........50.........60.........70.........80.........90.........100.........110...
 
   65....70.........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  ARQERATQRKTMGKPPVDDDIPAEEQVRILRKLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPL
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Template Sequence  ALPKAKLKEI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VAESDVMLKEGYENFFDKLQQHSIPVFIFSAGIGDVLEEV
Template Known Secondary structure  T
BGGG..............................TS


B
BTTT

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   114.....120... ......130.........140.........150.........160...
 
   145....150 .........160.........170.........180.. .......190.........200........
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Query Sequence  LEALDI. . . . . . . . . . . . . . AKYFSVVIGGDDVQNKKPHPDPLLLVAERMGI. . APQQMLFVGDSRNDIQAAKAAGCPSV
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Template Sequence  IRQAGVYHPNVKVVSNFMDFDETGVLKGFKGELIHVFNKHDGALRNTEYFNQLKDNSNIILLGDSQGDLRMADGVANVEH
Template Known Secondary structure  TT


TT

TTSB
SS


TT
TTTTT

SSSGGGGTTTT
S

S
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   164.....170.........180.........190.........200.........210.........220.........230.........240...
 
   209210....
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Query Sequence  GLTYGY
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Template Sequence  ILKIGY
Template Known Secondary structure 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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