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Job DescriptionP32662
Confidence97.12%DateThu Jan 5 11:49:55 GMT 2012
Rank147Aligned Residues206
% Identity14%Templatec3mpoD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:predicted hydrolase of the had superfamily; PDBTitle: the crystal structure of a hydrolase from lactobacillus brevis
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  IRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEERVITWIGNGADVLMERALTWARQERATQRKTMGKPPVDDDIP
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Template Sequence  IKLIAIDIDGTLQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAXDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYE
Template Known Secondary structure 
S
TTTT

TTTT

SS
GGGTTT

SSS
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   3......10.........20.........30.........40.........50.........60.........70.........80..
 
   87..90......... 100.........110.........120.........130.........140.. .
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Query Sequence  AEEQVRILRKLFD. . . . . . . . . . . . . . . . . . RYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVA. . . . . P
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Template Sequence  DYIDLEAWARKVRAHFQIETPDYIYTANKDISAYTIAESYLVRXLIQYREVSETPRDLTISKAXFVDYPQVIEQVKANXP
Template Known Secondary structure  T


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SS

T



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   91........100.........110.........120.........130.........140.........150.........160.........170
 
   144.....150.........160.........170.........180.........190.........200.........210........
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Query Sequence  LLEALDIAKYFSVVIGGDDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE
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Template Sequence  QDFKDRFSVVQSAPYFIEVXNRRASKGGTLSELVDQLGLTADDVXTLG. . . NDLTXIKYAG. . . LGVAXGNAIDE
Template Known Secondary structure  TTTT

TT

GGG

...TTST...


TT

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   171........180.........190.........200.........210........ .220........ .230.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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