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Job DescriptionP32662
Confidence99.95%DateThu Jan 5 11:49:55 GMT 2012
Rank16Aligned Residues222
% Identity19%Templatec2no5B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:(s)-2-haloacid dehalogenase iva; PDBTitle: crystal structure analysis of a dehalogenase with intermediate complex
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  FEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEERVITWIGNGADVLMERALTWARQERATQRKTMGKPPVDD
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Template Sequence  VDSLRACVFAY. GTLLDVHSAVMRNADEVGASA. . . . . . . EALSMLWRQRQLEYSWTRTLMHQYADFWQLTDEALTFALR
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B.TTTB
TTT
TT.......TT



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   2.......10.. .......20.........30... ......40.........50.........60.........70...
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  DIPAEEQVRILRKLFDRYYGEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGGDDV
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Template Sequence  TYHLEDRKGLKDRLMSAY. . . . . . KELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDL
Template Known Secondary structure  TT
TT......T

B
TTTTT
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T
GGG
S
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   75....80.........90.. .......100.........110.........120.........130.........140........
 
   164.....170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  QNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIDLSQPDVIYQSINDLLPALG
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Template Sequence  KIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFA. PLKHQVNSLSELWPLLA
Template Known Secondary structure  T

TTST

GGGS
T

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TTS.

SSSGGG
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   149150.........160.........170.........180.........190.........200....... ..210.........220....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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