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Job DescriptionP32662
Confidence99.32%DateThu Jan 5 11:49:55 GMT 2012
Rank89Aligned Residues182
% Identity12%Templatec2i7dB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:5'(3')-deoxyribonucleotidase, cytosolic type; PDBTitle: structure of human cytosolic deoxyribonucleotidase in2 complex with deoxyuridine, alf4 and mg2+
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   10.........20.........30.........40.........50.........60.........70.........80.........
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Query Sequence  VAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEERVITWIGNGADVLMERALTWARQERATQRKTMGKPPVDDDIPAEE
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Template Sequence  VLVDMDGVLADFEAGLLRGFRRRFPEEPHVP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LEQRRGFLAREQYRAL
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SBTTTB
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   7..10.........20.........30....... ..40.........50...
 
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Query Sequence  QVRILRKLFDRYYGEVAEEGTFLFPHVADTLGALQA. KGLPLGLVTNKPTPFVAPLLEALD. IAKYFSVVIGGDDVQNKK
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Template Sequence  RPDLADKVASVYEAPGFFLDLEPIPGALDAVREMNDLPDTQVFICTSPLLKYHHCVGEKYRWVEQHL. . . . . . . . . . . GP
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TTTSTTTTTT

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   54.....60.........70.........80.........90.........100.........110.........120 ..
 
   168.170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  PHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGEAIDLSQPDVIYQSINDLLPAL
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Template Sequence  QFVERIILTRDKTVVLGD. . LLIDDKDTVRGQEETPSWEHILFTCCHNRHLV. . LPPTRRRLLSWSDNWREI
Template Known Secondary structure  TT
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GGGS

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   123......130.........140 .........150.........160.........170.. .......180.........190
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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