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Job DescriptionP41442
Confidence99.91%DateThu Jan 5 12:01:33 GMT 2012
Rank3Aligned Residues107
% Identity64%Templatec3fu1B_
PDB info PDB header:protein transportChain: B: PDB Molecule:general secretion pathway protein g; PDBTitle: crystal structure of the major pseudopilin from the type 2 secretion2 system of vibrio cholerae
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   35....40.........50.........60.........70.........80.........90.........100.........110....
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Query Sequence  GNKEKADKQKAVSDIVALENALDMYKLDNHHYPTTNQGLESLVEAPTLPPLAANYNKEGYIKRLPADPWGNDYVLVNPGE
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Template Sequence  GNKEKADQQKAVTDIVALENALDMYKLDNSVYPTTDQGLEALVTKPTN. PEPRNYREGGYIKRLPKDPWGNDYQYLSPGD
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TTTTGGGGTS


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   26...30.........40.........50.........60.........70... ......80.........90.........100....
 
   115....120.........130.. .......140..
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Query Sequence  HGAYDLLSAGPDGEMGTE. . . DDITNWGLSK
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Template Sequence  KGTIDVFTLGADGQEGGEGTGADIGNWNIQD
Template Known Secondary structure  SSSS
TTTTSSS
SGGG

GGGGGG
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   105....110.........120.........130.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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