Return to main results Retrieve Phyre Job Id

Job DescriptionP41442
Confidence4.38%DateThu Jan 5 12:01:33 GMT 2012
Rank77Aligned Residues17
% Identity41%Templatec1emzA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:envelope glycoprotein e1; PDBTitle: solution structure of fragment (350-370) of the2 transmembrane domain of hepatitis c envelope glycoprotein3 e1
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........
Predicted Secondary structure 
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Query Sequence  GVLASLVVPNLMGNKEK
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Template Sequence  GVLAGIAYFSMVGNWAK
Template Known Secondary structure 
Template Predicted Secondary structure 

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   5....10.........20.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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