Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFB5
Confidence99.94%DateThu Jan 5 11:25:49 GMT 2012
Rank11Aligned Residues140
% Identity20%Templated1gkza2
SCOP infoATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase alpha-ketoacid dehydrogenase kinase, C-terminal domain
Resolution2.2

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   197..200.........210....... ..220.........230.........240.........250....... ..260......
Predicted Secondary structure 





...






















.......
Query SS confidence 




















. . .







































. . . . . . .








Query Sequence  ESIHKVAERVVTLVSMELPDN. . . VRLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQALGPEG. . . . . . . GEIILRTRT
Query Conservation                       ...             
  
              
        .......  
      
Alig confidence 




















...







































.......







.
Template Conservation       

   
                
 
          
   
  

 


 


                
 
   .
Template Sequence  LSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHVAARFPFIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIA.
Template Known Secondary structure 
S



STT



T
TT
TTS


.
Template Predicted Secondary structure 




















.
Template SS confidence 















































































   195....200.........210.........220.........230.........240.........250.........260.........270...
 
   267..270.........280.........290.........300......... 310.........320.........330....... ..340....
Predicted Secondary structure 

























.








.
Query SS confidence 










































.



























.






Query Sequence  AFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTLFYPMVSGRE. GGTGLGLSIARNLIDQHSGKIEFTSWPG. HTEFSVY
Query Conservation                
 
 
 
 
 

  
    

 

 


 . 





 
 
 

  


 
 
 
  
.

 
 
 
Alig confidence  .........

































.



























.






Template Conservation  .........       
 
 
 
 

       


   
     
 



 
        

 
 
 
  
 

   
 
Template Sequence  . . . . . . . . . NNDVDLIIRISDRGGGIAHKDLDRVMDYHFTTAPMHGFGFGLPTSRAYAEYLGGSLQLQSLQGIGTDVYLR
Template Known Secondary structure  .........
SS

S



TTTTTTTTSTT





S
SS
TT
TTT
Template Predicted Secondary structure  .........

























Template SS confidence 















































































   274.....280.........290.........300.........310.........320.........330.........340....
 
   345.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  LP
Query Conservation 

Alig confidence 

Template Conservation 
 
Template Sequence  LR
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   370.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions