 |
Job Description | P0AFB5 | Confidence | 97.69% | Date | Thu Jan 5 11:25:49 GMT 2012 |
Rank | 95 | Aligned Residues | 91 |
% Identity | 23% | Template | d1ei1a2 |
SCOP info | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
| ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
| DNA gyrase/MutL, N-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
238 | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | |
. | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 300 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  | . | . | . | . | . | . | . | . |  |  |
|
|
|
|  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | Q | V | L | L | N | I | V | R | N | A | L | Q | A | L | G | P | E | . |
G | G | E | I | I | L | R | T | R | T | A | F | Q | L | T | L | H | G | E | R | Y | R | L | A | A | R | I | D | V | E | D | N | G | P | G | I | P | P | H | L | Q | D | . |
. |
. |
. |
. |
. |
. |
. |
T | L | F | Y | P | M | V | S | G | R |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |
|   |   |   | . | . | . | . | . | . | . | . |   |
|
|   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |
|
|   |
|   |
|   |
|   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | H | H | M | V | F | E | V | V | D | N | A | I | D | E | A | L | A | G | H | C | K | E | I | I | V | T | I | H | A | D | N | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | S | V | Q | D | D | G | R | G | I | P | T | G | I | H | P | E | E | G | V | S | A | A | E | V | I | M | T | V | L | H | A | G | G |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |
| T | T | S |
| . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
| S | S |
|
|
|
| S | B |
| T | T | T | S | S | B |  |  |  |  |  |  |  | S | T | T |
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
36 | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . |
  |
  |   |
309 | |
|
|
|
|
|
|
|
|
|
310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . |
Predicted Secondary structure |   |
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | G | T | G | L | G | L | S | I | A | R | N | L | I | D | Q | H | S | G | K | I | E | F | T | S | W | P | G | H | T | E | F | S | V | Y | L |
Query Conservation |   |
  | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
|
|   |
|   |
|   |
|
|   |   |
|
|
|   |
|   |
|   |
|   |   |
|
|
|   |
|   |
|   |
|
Alig confidence |   |
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|
|   |   |
|   |   |   |
|   | . | . | . | . |   |   |   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
K | F | D | D | N | S | Y | K | V | S | G | G | L | H | G | V | G | V | S | V | V | N | A | L | S | Q | . |
. |
. |
. |
K | L | E | L | V | I | Q | R | E | G | K | I | H | R | Q | I | Y |
Template Known Secondary structure |   |
| S | S | S | S | S |
| S | S |
| S |
|
| S | S |
|  |  |  |  |  |  |  | T |  |  | . | . | . | . |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
103 | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
|
|
|
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|