Job Description P0AFB5 Confidence 88.30% Date Thu Jan 5 11:25:49 GMT 2012 Rank 131 Aligned Residues 36 % Identity 11% Template c3pxpA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:helix-turn-helix domain protein; PDBTitle: crystal structure of a pas and dna binding domain containing protein2 (caur_2278) from chloroflexus aurantiacus j-10-fl at 2.30 a3 resolution Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.				.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		Q	P	D	A	G	Q	I	L	N	S	L	.	.	.	I	N	S	I	L	L	I	D	D	N	L	A	I	H	Y	A	N	P	A	A	Q	Q	L	L	A
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		E	E	S	L	Q	Y	L	I	D	X	I	R	N	X	N	V	P	A	F	V	T	D	Q	Y	V	N	I	I	A	A	N	X	I	T	I	R	F	F	N
Template Known Secondary structure														T		S	S							T	T		B													T
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions