Job Description P0AFB5 Confidence 98.72% Date Thu Jan 5 11:25:49 GMT 2012 Rank 72 Aligned Residues 108 % Identity 6% Template c3f1oB_ PDB info PDB header:transcription Chain: B: PDB Molecule:aryl hydrocarbon receptor nuclear translocator; PDBTitle: crystal structure of the high affinity heterodimer of hif22 alpha and arnt c-terminal pas domains, with an internally-3 bound artificial ligand Resolution 1.60 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.												.
Query SS confidence																																																				.	.												.
Query Sequence		L	N	S	L	I	N	S	I	L	L	I	D	D	N	L	A	I	H	Y	A	N	P	A	A	Q	Q	L	L	A	Q	S	S	R	K	L	F	G	T	P	L	P	E	L	L	S	Y	F	S	L	N	.	.	I	E	L	M	Q	E	S	L	E	A	G	.	Q	G	F	T	D	N	E	V	T	L	V	I	D	G	R	S
Query Conservation																																																				.	.												.
Alig confidence																																																				.	.												.
Template Conservation
Template Sequence		V	C	Q	P	T	R	F	I	S	R	H	N	I	E	G	I	F	T	F	V	D	H	R	C	V	A	T	V	G	Y	Q	P	Q	E	L	L	G	K	N	I	V	E	F	C	H	P	E	D	Q	Q	L	L	R	D	S	F	Q	Q	V	V	K	L	K	G	Q	V	L	S	V	M	F	R	F	R	S	K	N	Q	E	W
Template Known Secondary structure														T	T		B						T	T						S			G	G	G	T	T	T	S	B	G	G	G	G	B		T	T	T												T	T	S	T	T												T	T	S
Template Predicted Secondary structure
Template SS confidence
		357	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	L	S	V	T	A	Q	R	M	P	D	G	M	I	L	L	E	M	A	P	M	D	N	Q	R	R	L	S	Q	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	W	M	R	T	S	S	F	T	F	Q	N	P	Y	S	D	E	I	E	Y	I	I	C	T	N	T	N	V	K	N	S
Template Known Secondary structure														T	T	S															S
Template Predicted Secondary structure
Template SS confidence
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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