Job Description P0AFB5 Confidence 99.49% Date Thu Jan 5 11:25:49 GMT 2012 Rank 26 Aligned Residues 103 % Identity 23% Template c2q2eB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:type 2 dna topoisomerase 6 subunit b; PDBTitle: crystal structure of the topoisomerase vi holoenzyme from2 methanosarcina mazei Resolution 4.00 Å

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		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.						310	.	.
Predicted Secondary structure																																																																										.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.
Query Sequence		I	E	Q	V	L	L	N	I	V	R	N	A	L	Q	A	L	G	P	E	G	G	E	I	I	L	R	T	R	T	A	F	Q	L	T	L	H	G	E	R	Y	R	L	A	A	R	I	D	V	E	D	N	G	P	G	I	P	P	H	L	Q	D	T	L	F	Y	P	M	V	S	G	R	E	.	.	.	.	.	G	G	T
Query Conservation																																																																										.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.																																			.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.
Template Sequence		L	I	T	T	V	K	E	A	V	D	N	A	L	D	A	C	E	E	A	G	I	L	P	D	I	L	V	Q	V	E	R	.	.	.	.	.	.	.	T	G	P	D	Y	V	T	V	I	I	E	D	N	G	P	G	I	V	R	E	Q	I	P	K	V	F	A	K	L	L	Y	G	F	H	A	L	K	S	R	G	Q	Q
Template Known Secondary structure																		T	T	T	S		S										.	.	.	.	.	.	.		T	T	T										S					G	G	G						S													S	S	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.								.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.		330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																			.									.	.
Query SS confidence																			.									.	.
Query Sequence		G	L	G	L	S	I	A	R	N	L	I	D	Q	H	S	G	K	.	I	E	F	T	S	W	P	G	.	.	H	T	E	F	S	V	Y	L	P	I
Query Conservation																			.									.	.
Alig confidence																			.									.	.
Template Conservation
Template Sequence		G	I	G	I	S	A	A	V	L	Y	A	Q	M	T	A	G	R	H	T	K	I	L	S	K	T	S	P	T	A	P	A	H	Y	Y	E	L	M	I
Template Known Secondary structure		S														T											S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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