Job Description P0AFB5 Confidence 99.97% Date Thu Jan 5 11:25:49 GMT 2012 Rank 8 Aligned Residues 228 % Identity 28% Template c2c2aA_ PDB info PDB header:transferase Chain: A: PDB Molecule:sensor histidine kinase; PDBTitle: structure of the entire cytoplasmic portion of a sensor2 histidine kinase protein Resolution 1.9 Å

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		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.
Query SS confidence																																																					.	.	.
Query Sequence		M	D	N	Q	R	R	L	S	Q	E	Q	L	Q	H	A	Q	Q	V	A	A	R	D	L	V	R	G	L	A	H	E	I	K	N	P	L	G	G	L	R	G	A	A	Q	L	L	S	K	A	L	P	D	.	.	.	P	S	L	L	E	Y	T	K	V	I	I	E	Q	A	D	R	L	R	N	L	V	D	R	L	L	G
Query Conservation																																																					.	.	.
Alig confidence																																																					.	.	.
Template Conservation
Template Sequence		M	E	N	V	T	E	S	K	E	L	E	R	L	K	R	I	D	R	M	K	T	E	F	I	A	N	I	S	H	E	L	R	T	P	L	T	A	I	K	A	Y	A	E	T	I	Y	N	S	L	G	E	L	D	L	S	T	L	K	E	F	L	E	V	I	I	D	Q	S	N	H	L	E	N	L	L	N	E	L	L	D
Template Known Secondary structure																																T																	T	G	G	G			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
								188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																														.															.
Query SS confidence		.	.	.	.	.	.																														.															.
Query Sequence		.	.	.	.	.	.	P	Q	L	P	G	T	R	V	T	E	S	I	H	K	V	A	E	R	V	V	T	L	V	S	M	E	L	P	D	.	N	V	R	L	I	R	D	Y	D	P	S	L	P	E	.	L	A	H	D	P	D	Q	I	E	Q	V	L	L	N	I	V	R	N	A	L	Q	A	L	G	P	E	G	G	E
Query Conservation		.	.	.	.	.	.																														.															.
Alig confidence		.	.	.	.	.	.																														.															.
Template Conservation
Template Sequence		F	S	R	L	E	R	K	S	L	Q	I	N	R	E	K	V	D	L	C	D	L	V	E	S	A	V	N	A	I	K	E	F	A	S	S	H	N	V	N	V	L	F	E	S	N	V	P	C	P	V	E	A	Y	I	D	P	T	R	I	R	Q	V	L	L	N	L	L	N	N	G	V	K	Y	S	K	K	D	A	P	D
Template Known Secondary structure								T																													T	T								S	S		S																									T			T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		I	I	L	R	T	R	T	A	F	Q	L	T	L	H	G	E	R	Y	R	L	A	A	R	I	D	V	E	D	N	G	P	G	I	P	P	H	L	Q	D	T	L	F	Y	P	M	V	S	G	R	E	G	G	T	G	L	G	L	S	I	A	R	N	L	I	D	Q	H	S	G	K	I	E	F	T	S	W	P	G	.	H
Query Conservation																																																																																.
Alig confidence										.	.	.	.	.	.	.	.																																	.	.	.																												.
Template Conservation										.	.	.	.	.	.	.	.																																	.	.	.
Template Sequence		K	Y	V	K	V	I	L	D	.	.	.	.	.	.	.	.	E	K	D	G	G	V	L	I	I	V	E	D	N	G	I	G	I	P	D	H	A	K	D	R	I	F	E	Q	F	Y	R	V	.	.	.	D	T	G	L	G	L	A	I	T	K	E	I	V	E	L	H	G	G	R	I	W	V	E	S	E	V	G	K	G
Template Known Secondary structure										.	.	.	.	.	.	.	.			T	T										S	S				G	G	G	T	T	G	G	G	S	T	T				.	.	.					T											T	T									T	T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.																																	.	.	.
Template SS confidence
		392	.	.	.	.	.	.	.									400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.				.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		339	340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	F	S	V	Y	L	P	I	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	F	F	V	W	I	P	K	D	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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