Job Description P0AFB5 Confidence 100.00% Date Thu Jan 5 11:25:49 GMT 2012 Rank 3 Aligned Residues 219 % Identity 17% Template c2bu8A_ PDB info PDB header:transferase Chain: A: PDB Molecule:pyruvate dehydrogenase kinase isoenzyme 2; PDBTitle: crystal structures of human pyruvate dehydrogenase kinase 22 containing physiological and synthetic ligands Resolution 2.5 Å

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		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.									.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.
Query Sequence		S	Q	E	Q	L	Q	H	A	Q	Q	V	A	A	R	D	L	V	R	G	L	A	H	E	I	K	N	P	L	G	G	L	R	G	A	A	Q	L	L	.	.	.	.	.	.	.	.	S	K	A	L	P	D	P	S	L	L	E	Y	T	K	V	I	I	E	Q	A	D	R	L	R	N	L	V	D	R	L	L	G	P	Q
Query Conservation																																								.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	L	D	K	D	P	E	D	H	R	T	L	S	Q	F	T	D	A	L	V	T	I	R	N	R	H	N	D	V	V	P	T	M	A	Q	G	V	L	E	Y	K	D	T	Y	G	D	D	P	V	S	N	Q	N	I	Q	Y	F	L	D	R	F	Y	L	S	R	I	S	I	R	M	L	I	N	Q	H	T	L	I	F
Template Known Secondary structure		T	T	S	S			T	T	S	T	T	T	T														T	T	T																																																			T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		190	.	.	.	.												.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.										.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Query Sequence		L	P	G	T	R	.	.	.	.	.	.	.	.	.	.	.	V	T	E	S	I	H	K	V	A	E	R	V	V	T	L	V	S	M	E	L	P	.	.	.	.	.	.	.	.	.	D	N	V	R	L	I	R	D	Y	D	P	S	L	P	E	L	A	H	D	P	D	Q	I	E	Q	V	L	L	N	I	V	R	N	A
Query Conservation							.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	G	S	T	N	P	A	H	P	K	H	I	G	S	I	D	P	N	C	N	V	S	E	V	V	K	D	A	Y	D	M	A	K	L	L	C	D	K	Y	Y	M	A	S	P	D	L	E	I	Q	E	I	N	A	A	N	S	K	Q	P	I	H	M	V	Y	V	P	S	H	L	Y	H	M	L	F	E	L	F	K	N	A
Template Known Secondary structure		S	S	S		S	S		S		S		B	T	T	B																										S												S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		250	.	.	.							.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure						.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.
Query Sequence		L	Q	A	L	.	.	.	.	.	.	G	P	E	G	G	E	I	I	L	R	T	R	T	A	F	Q	L	T	L	H	G	E	R	Y	R	L	A	A	R	I	D	V	E	D	N	G	P	G	I	P	P	H	L	Q	D	T	L	F	Y	P	M	V	S	G	R	E	G	G	T	G	L	G	L	S	I	A	R	N	L	I
Query Conservation						.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.
Template Sequence		M	R	A	T	V	E	S	H	E	S	S	L	I	L	P	P	I	K	V	M	V	A	.	.	.	.	.	.	.	.	.	.	L	G	E	E	D	L	S	I	K	M	S	D	R	G	G	G	V	P	L	R	K	I	E	R	L	F	S	Y	M	Y	S	T	P	L	A	G	F	G	Y	G	L	P	I	S	R	L	Y	A
Template Known Secondary structure								T	T	T	T		S											.	.	.	.	.	.	.	.	.	.			S	S																			G	G	G	G		T	T	T	T						S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270											.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		D	Q	H	S	G	K	I	E	F	T	S	W	P	G	.	H	T	E	F	S	V	Y	L	P
Query Conservation																.
Alig confidence																.
Template Conservation
Template Sequence		K	Y	F	Q	G	D	L	Q	L	F	S	M	E	G	F	G	T	D	A	V	I	Y	L	K
Template Known Secondary structure				T	T									T	T
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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